2024
Transcription factor-dependent regulatory networks of sexual reproduction in Fusarium graminearum.
Kim W, Kim D, Wang Z, Liu M, Townsend J, Trail F. Transcription factor-dependent regulatory networks of sexual reproduction in Fusarium graminearum. MBio 2024, e0303024. PMID: 39589130, DOI: 10.1128/mbio.03030-24.Peer-Reviewed Original ResearchMating-type locusSexual reproductionKnockout mutantsTranscription factorsTranscriptome dataStage of sexual developmentRegulatory networksTranscriptional cascadeDevelopmental phenotypesSexual developmentAscospore productionRegulation of sexual developmentUpstream activatorSexual fruiting bodiesTranscriptional regulatory cascadeMulticellular body planRegulate sexual developmentMultiple transcription factorsFusarium graminearum</i>Systems biology approachComplex reproductive biologyEarly stages of sexual developmentArrest phenotypeTF networksFilamentous fungi
2018
Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development
Wang Z, Gudibanda A, Ugwuowo U, Trail F, Townsend J. Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development. Fungal Biology Reviews 2018, 32: 249-264. DOI: 10.1016/j.fbr.2018.02.001.ChaptersModel speciesFungal developmentGenome-wide gene expression dataEvolutionary developmental biologyEvo-devo researchGenome-wide analysisSystems biology strategiesGene expression dataEvolutionary genomicsSpecies phylogenyGenetic screenDevelopmental biologyDevelopmental traitsGene networksRegulatory networksFungal modelCell biologyModern biologyFossil recordKnockout strategiesDevelopmental processesMultiple speciesSystems biologyMolecular geneticsExpression data