2001
Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales
McCloskey J, Graham D, Zhou S, Crain P, Ibba M, Konisky J, Söll D, Olsen G. Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales. Nucleic Acids Research 2001, 29: 4699-4706. PMID: 11713320, PMCID: PMC92529, DOI: 10.1093/nar/29.22.4699.Peer-Reviewed Original ResearchConceptsPost-transcriptional modificationsSmall ribosomal subunit RNA sequencesRibose-methylated nucleosidesClose phylogenetic relationshipArchaeal RNAArchaeal tRNAsPhylogenetic relationshipsMethanococcus jannaschiiMethanococcus maripaludisTransfer RNAPhylogenetic relationsBacterial tRNAsMethanococcus vannieliiPosition 37Methanococcus igneusModification differencesModification patternsTRNAMethanococcus thermolithotrophicusRNA sequencesRNATemperature of growthUnknown structureFamily membersEukarya
1975
Maturation of a hypermodified nucleoside in transfer RNA
Agris P, Armstrong D, Schäfer K, Söll D. Maturation of a hypermodified nucleoside in transfer RNA. Nucleic Acids Research 1975, 2: 691-699. PMID: 49880, PMCID: PMC343621, DOI: 10.1093/nar/2.5.691.Peer-Reviewed Original Research
1974
Covalent attachment of fluorescent groups to transfer ribonucleic acid. Reactions with 4-bromomethyl-7-methoxy-2-oxo-2H-benzopyran.
Yang C, Soell D. Covalent attachment of fluorescent groups to transfer ribonucleic acid. Reactions with 4-bromomethyl-7-methoxy-2-oxo-2H-benzopyran. Biochemistry 1974, 13: 3615-21. PMID: 4367729, DOI: 10.1021/bi00714a033.Peer-Reviewed Original ResearchAlkaline PhosphataseAmino Acyl-tRNA SynthetasesBenzopyransBromineCarbon RadioisotopesEscherichia coliFluorescenceFormatesGlutamatesMethionineMethyl EthersModels, ChemicalNucleosidesPhosphoric Diester HydrolasesPseudouridineRibonucleasesRNA, BacterialRNA, TransferSpectrometry, FluorescenceStructure-Activity RelationshipTransfer RNA AminoacylationUridine
1971
Enzymatic Modification of Transfer RNA
Söll D. Enzymatic Modification of Transfer RNA. Science 1971, 173: 293-299. PMID: 4934576, DOI: 10.1126/science.173.3994.293.Peer-Reviewed Original ResearchConceptsTRNA-modifying enzymesTRNA moleculesTRNA genesTransfer RNAAmino acid biosynthesisParticular tRNA speciesNucleic acid-protein interactionsAminoacyl-tRNA synthetaseSimple selection procedureAmino acid acceptorPrecursor tRNAsActive tRNAMature tRNACellular processesTRNA speciesRegulatory mutantsAcid biosynthesisRNA precursorsProtein factorsIsoacceptor tRNAsDifferent amino acidsNucleotide sequencePolynucleotide levelBiological functionsTRNA
1970
Identification of the Cytokinin-Active Ribonucleosides in Pure Escherichia coli tRNA Species
Bartz J, Söll D, Burrows W, Skoog F. Identification of the Cytokinin-Active Ribonucleosides in Pure Escherichia coli tRNA Species. Proceedings Of The National Academy Of Sciences Of The United States Of America 1970, 67: 1448-1453. PMID: 4922291, PMCID: PMC283372, DOI: 10.1073/pnas.67.3.1448.Peer-Reviewed Original ResearchN6-(Δ2-isopentenyl)adenosine: Biosynthesis in vitro in transfer RNA by an enzyme purified from escherichia coli
Bartz J, Kline L, Söll D. N6-(Δ2-isopentenyl)adenosine: Biosynthesis in vitro in transfer RNA by an enzyme purified from escherichia coli. Biochemical And Biophysical Research Communications 1970, 40: 1481-1487. PMID: 4326583, DOI: 10.1016/0006-291x(70)90035-5.Peer-Reviewed Original ResearchMeSH KeywordsAdenineAdenine NucleotidesAlkenesAnimalsCentrifugation, Density GradientChromatography, PaperColiphagesEscherichia coliHydrogen-Ion ConcentrationHydrolysisLiverMolecular WeightMycoplasmaNucleosidesOrganophosphorus CompoundsPhosphoric AcidsPolynucleotidesPotassium PermanganateRatsRNA, BacterialRNA, TransferRNA, ViralTransferases
1969
Transfer ribonucleic acid from Mycoplasma.
Hayashi H, Fisher H, Soell D. Transfer ribonucleic acid from Mycoplasma. Biochemistry 1969, 8: 3680-6. PMID: 4897946, DOI: 10.1021/bi00837a028.Peer-Reviewed Original ResearchAmino AcidsCarbon IsotopesCell-Free SystemCelluloseChemical PhenomenaChemistryChromatography, Ion ExchangeChromatography, PaperElectrophoresisEscherichia coliFormatesHot TemperatureMethionineMycoplasmaNucleic Acid DenaturationNucleosidesPeptide BiosynthesisPolynucleotidesRNA, BacterialRNA, TransferSpecies SpecificityStimulation, ChemicalTritiumUltracentrifugationUracil Nucleotides