2024
A High-Quality Blue Whale Genome, Segmental Duplications, and Historical Demography
Bukhman Y, Morin P, Meyer S, Chu L, Jacobsen J, Antosiewicz-Bourget J, Mamott D, Gonzales M, Argus C, Bolin J, Berres M, Fedrigo O, Steill J, Swanson S, Jiang P, Rhie A, Formenti G, Phillippy A, Harris R, Wood J, Howe K, Kirilenko B, Munegowda C, Hiller M, Jain A, Kihara D, Johnston J, Ionkov A, Raja K, Toh H, Lang A, Wolf M, Jarvis E, Thomson J, Chaisson M, Stewart R. A High-Quality Blue Whale Genome, Segmental Duplications, and Historical Demography. Molecular Biology And Evolution 2024, 41: msae036. PMID: 38376487, PMCID: PMC10919930, DOI: 10.1093/molbev/msae036.Peer-Reviewed Original ResearchConceptsLong-read RNA-seq dataBody sizePacBio long readsGiant body sizeRNA-seq dataGenome assemblyGenome sizeLong readsSegmental duplicationsManual curationGenomeIsolation dateHistorical demographyBiological traitsInsulin-like growth factor 1 geneReference-qualityResistance to cancerBlue whale populationWhale populationsGenesBalaenoptera musculusInterglacial periodsBlue whalesConservation researchPhocoena sinus
2013
The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes
Bracken-Grissom H, Collins A, Collins T, Crandall K, Distel D, Dunn C, Giribet G, Haddock S, Knowlton N, Martindale M, Medina M, Messing C, O'Brien S, Paulay G, Putnam N, Ravasi T, Rouse G, Ryan J, Schulze A, Wörheide G, Adamska M, Bailly X, Breinholt J, Browne W, Diaz M, Evans N, Flot J, Fogarty N, Johnston M, Kamel B, Kawahara A, Laberge T, Lavrov D, Michonneau F, Moroz L, Oakley T, Osborne K, Pomponi S, Rhodes A, Santos S, Satoh N, Thacker R, Van de Peer Y, Voolstra C, Welch D, Winston J, Zhou X. The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes. Journal Of Heredity 2013, 105: 1-18. PMID: 24336862, PMCID: PMC4072906, DOI: 10.1093/jhered/est084.Peer-Reviewed Original ResearchConceptsGenome/transcriptome sequencingInvertebrate genomesMetazoan speciesPhyletic diversityMarine taxaPhylogenetic placementTaxonomic spectrumTranscriptome sequencingStudy taxaWhole genomeGenomeConservation researchInvertebratesSpeciesTaxaSequencingComparative approachPlacozoaCnidariaTranscriptomeCtenophoraPoriferaHuman healthArthropodaGenomics
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