2021
LinkedImm: a linked data graph database for integrating immunological data
Bukhari SAC, Pawar S, Mandell J, Kleinstein SH, Cheung KH. LinkedImm: a linked data graph database for integrating immunological data. BMC Bioinformatics 2021, 22: 105. PMID: 34433410, PMCID: PMC8385794, DOI: 10.1186/s12859-021-04031-9.Peer-Reviewed Original ResearchConceptsGraph databaseGraph-based query languageVisual graph query interfacesNoSQL database technologyHeterogeneous biological dataWeb-based dashboardQuery interfaceQuery languageDatabase technologyGraph dataSQL databaseData retrievalData integrationMultiple data typesBiomedical domainNatural languageData typesUsersBiological dataMultiple sourcesScalable methodDatabaseLanguageMetadataSystems biology studies
2019
A linked data graph approach to integration of immunological data
Bukhari SAC, Mandell J, Kleinstein SH, Cheung KH. A linked data graph approach to integration of immunological data. Bioinformatics And Biomedicine 2019, 00: 1742-1749. PMID: 34707915, PMCID: PMC8547546, DOI: 10.1109/bibm47256.2019.8982986.Peer-Reviewed Original ResearchGraph databaseDatabase technologyGraph-based query languageNatural language query interfaceNoSQL database technologyGraph-based databasesNeo4j graph databaseSQL database technologyHeterogeneous biological dataWeb-based dashboardQuery interfaceQuery languageData retrievalData integrationMultiple data typesBiological databasesData repositoryData typesResponse measurement dataGraph approachPathway dataData setsUsersBiological dataScalable method