2015
Comparing Mycobacterium tuberculosis genomes using genome topology networks
Jiang J, Gu J, Zhang L, Zhang C, Deng X, Dou T, Zhao G, Zhou Y. Comparing Mycobacterium tuberculosis genomes using genome topology networks. BMC Genomics 2015, 16: 85. PMID: 25766780, PMCID: PMC4342819, DOI: 10.1186/s12864-015-1259-0.Peer-Reviewed Original ResearchMeSH KeywordsComputational BiologyEvolution, MolecularGenome, BacterialHumansMycobacterium tuberculosisPhylogenyTuberculosisConceptsGenomic structural variationWhole genome-based phylogenetic analysisGenome-based phylogenetic analysisPhylogenetic analysisM. tuberculosis genomeGene gain/lossTuberculosis genomeComplete gene annotationStructural variationsComparative genomic analysisGene family membersInvestigation of genesRelated bacterial strainsBacterial strainsResistance-related genesGenome topologyGene duplicationGene annotationGenome rearrangementsClosest speciesPhylogenetic studiesPhylogenetic treeGene locationGene homologyGenomic analysis
2010
Evolution of peroxisome proliferator-activated receptor gamma alternative splicing.
Dou T, Xu J, Gao Y, Gu J, Ji C, Xie Y, Zhou Y. Evolution of peroxisome proliferator-activated receptor gamma alternative splicing. Frontiers In Bioscience-Elite 2010, 2: 1334-43. PMID: 20515805, DOI: 10.2741/e193.Peer-Reviewed Original ResearchMeSH KeywordsAlternative SplicingAnimalsEvolution, MolecularExonsHumansPolymorphism, Single NucleotidePPAR gammaConceptsKa/KsGamma geneHigher Ka/KsAlternative splicing exonsDifferent transcript variantsPPAR-gamma geneAdaptive evolutionVertebrate speciesAlternative splicingEvolutionary changeAlternative exonsEST dataGenomic sequencesNew exonsPeroxisome proliferator-activated receptor gammaTranscript variantsProliferator-activated receptor gammaConstitutive counterpartExonsGenesReceptor gammaGlucose homeostasisVertebratesImportant roleSplicing