2024
Speech motion anomaly detection via cross-modal translation of 4D motion fields from tagged MRI
Liu X, Xing F, Zhuo J, Stone M, Prince J, El Fakhri G, Woo J. Speech motion anomaly detection via cross-modal translation of 4D motion fields from tagged MRI. Proceedings Of SPIE--the International Society For Optical Engineering 2024, 12926: 129262w-129262w-5. PMID: 39238547, PMCID: PMC11377028, DOI: 10.1117/12.3006874.Peer-Reviewed Original ResearchCross-modal translationHealthy individualsTongue cancer patientsMotion fieldOut-of-distributionOne-class SVMPatient dataAnomaly detectionAnomaly detectorCancer patientsTagged MRISpeech-related disordersGeneralization capabilityReconstruction qualitySpeech qualityArticulatory-acoustic relationsPatientsSpeech waveformTraining setInnovative treatmentsMRITest setMotion patternsArticulatory featuresTraining translators
2022
Principal Component Characterization of Deformation Variations Using Dynamic Imaging Atlases
Xing F, Jin R, Gilbert I, Fakhri G, Perry J, Sutton B, Woo J. Principal Component Characterization of Deformation Variations Using Dynamic Imaging Atlases. Proceedings Of The International Society For Magnetic Resonance In Medicine ... Scientific Meeting And Exhibition. 2022 DOI: 10.58530/2022/2849.Peer-Reviewed Original Research
2020
Motion correction for PET data using subspace-based real-time MR imaging in simultaneous PET/MR
Marin T, Djebra Y, Han P, Chemli Y, Bloch I, Fakhri G, Ouyang J, Petibon Y, Ma C. Motion correction for PET data using subspace-based real-time MR imaging in simultaneous PET/MR. Physics In Medicine And Biology 2020, 65: 235022. PMID: 33263317, PMCID: PMC7985095, DOI: 10.1088/1361-6560/abb31d.Peer-Reviewed Original ResearchConceptsPositron emission tomography reconstructionMotion-corrected PET reconstructionsPET reconstructionMotion-corrected PET imagesIrregular respiratory motionMotion fieldMotion correction methodMotion correction approachIrregular motion patternsUndersampled k-space dataImage quality of positron emission tomographyQuality of positron emission tomographyMotion patternsLow-rank characteristicsRespiratory motionContrast-to-noise ratioEstimated motion fieldSurrogate signalsMotion correctionK-space dataImage qualityReal-time MR imagingSimultaneous PET/MRMotion artifact reductionPET/MR scanners
2019
Analysis of genioglossus-centered tongue muscle function groups from dynamic magnetic resonance imaging
Xing F, Stone M, Goldsmith T, Prince J, Fakhri G, Woo J. Analysis of genioglossus-centered tongue muscle function groups from dynamic magnetic resonance imaging. The Journal Of The Acoustical Society Of America 2019, 146: 3086-3086. DOI: 10.1121/1.5137722.Peer-Reviewed Original ResearchMuscle functional groupsSpeech motor controlMotor controlInternal tongue musclesMuscle motionInternal musclesTongue muscle functionMuscle functionMuscle locationMotion patternsFunctional groupsMuscleDynamic magnetic resonance imagingFunctional lossDynamic magnetic resonanceMagnetic resonance imagingExtract motionCooperation patternsNormal controlsGenioglossusDigastric muscleUnique groupGroupResonance imagingClinical observationsAtlas-Based Tongue Muscle Correlation Analysis From Tagged and High-Resolution Magnetic Resonance Imaging.
Xing F, Stone M, Goldsmith T, Prince J, El Fakhri G, Woo J. Atlas-Based Tongue Muscle Correlation Analysis From Tagged and High-Resolution Magnetic Resonance Imaging. Journal Of Speech Language And Hearing Research 2019, 62: 2258-2269. PMID: 31265364, PMCID: PMC6808360, DOI: 10.1044/2019_jslhr-s-18-0495.Peer-Reviewed Original ResearchConceptsInternal tongue musclesFloor of mouthMagnetic resonance imagingHigh-resolution magnetic resonance imagingMuscle pairsTongue musclesRehabilitation strategiesSpeech sound productionResonance imagingCoordination patternsSpeech motor controlMuscle locationDisease populationMotion of muscleMotor controlIntersubjective behaviorsManually labeled masksMuscleGlossectomy patientsExtrinsic tongue musclesControl subjectsBloc movementFunctional lossPatientsMotion patterns
2018
A Sparse Non-Negative Matrix Factorization Framework for Identifying Functional Units of Tongue Behavior From MRI
Woo J, Prince J, Stone M, Xing F, Gomez A, Green J, Hartnick C, Brady T, Reese T, Wedeen V, Fakhri G. A Sparse Non-Negative Matrix Factorization Framework for Identifying Functional Units of Tongue Behavior From MRI. IEEE Transactions On Medical Imaging 2018, 38: 730-740. PMID: 30235120, PMCID: PMC6422735, DOI: 10.1109/tmi.2018.2870939.Peer-Reviewed Original ResearchConceptsNon-negative matrix factorization frameworkProbabilistic graphical model frameworkMatrix factorization frameworkGraphical model frameworkWeight mapSpectral clusteringSynthetic dataMuscle coordination patternsMatrix factorizationMotion dataMotion patternsTongue motionFactorization frameworkTwo-dimensional imagesMuscle groupsLocal regionsLocal muscle groupLocal structural elementsTagged-MRIImagesFunctional muscle groups
2015
Non-Local and Motion-Based Low-Rank Regularizations for Gated CT Reconstruction
Kim K, Fakhri G, Li Q. Non-Local and Motion-Based Low-Rank Regularizations for Gated CT Reconstruction. 2015, 1-3. DOI: 10.1109/nssmic.2015.7582219.Peer-Reviewed Original ResearchLow-rank regularizationNon-local weightsRegistration matrixLow-rank propertyMulti-frame imagesHigh noiseNon-local regularizationImage patchesMotion blurring artifactsConcurrent executionIterative reconstruction algorithmBlurring artifactsMotion-basedReconstruction algorithmMotion patternsNon-localReduce noiseImage qualityLow-dose conditionsComputer simulationsMotion artifactsNoiseGated computed tomographyGated CTRegularization