2020
Complex multicomponent patterns rendered on a 3D DNA-barrel pegboard.
Wickham SFJ, Auer A, Min J, Ponnuswamy N, Woehrstein JB, Schueder F, Strauss MT, Schnitzbauer J, Nathwani B, Zhao Z, Perrault SD, Hahn J, Lee S, Bastings MM, Helmig SW, Kodal AL, Yin P, Jungmann R, Shih WM. Complex multicomponent patterns rendered on a 3D DNA-barrel pegboard. Nature Communications 2020, 11: 5768. PMID: 33188187, PMCID: PMC7666213, DOI: 10.1038/s41467-020-18910-x.Peer-Reviewed Original ResearchDNA-Barcoded Fluorescence Microscopy for Spatial Omics.
Schueder F, Unterauer EM, Ganji M, Jungmann R. DNA-Barcoded Fluorescence Microscopy for Spatial Omics. Proteomics 2020, e1900368. PMID: 33030780, DOI: 10.1002/pmic.201900368.Peer-Reviewed Original ResearchLive-cell super-resolved PAINT imaging of piconewton cellular traction forces.
Brockman JM, Su H, Blanchard AT, Duan Y, Meyer T, Quach ME, Glazier R, Bazrafshan A, Bender RL, Kellner AV, Ogasawara H, Ma R, Schueder F, Petrich BG, Jungmann R, Li R, Mattheyses AL, Ke Y, Salaita K. Live-cell super-resolved PAINT imaging of piconewton cellular traction forces. Nature Methods 2020, 17: 1018-1024. PMID: 32929270, PMCID: PMC7574592, DOI: 10.1038/s41592-020-0929-2.Peer-Reviewed Original ResearchSuper-Resolution Spatial Proximity Detection with Proximity-PAINT.
Schueder F, Lara-Gutiérrez J, Haas D, Beckwith KS, Yin P, Ellenberg J, Jungmann R. Super-Resolution Spatial Proximity Detection with Proximity-PAINT. Angewandte Chemie (International Ed. In English) 2020 PMID: 32936507, PMCID: PMC7839522, DOI: 10.1002/anie.202009031.Peer-Reviewed Original ResearchLocalization microscopy at doubled precision with patterned illumination.
Cnossen J, Hinsdale T, Thorsen RØ, Siemons M, Schueder F, Jungmann R, Smith CS, Rieger B, Stallinga S. Localization microscopy at doubled precision with patterned illumination. Nature Methods 2020, 17: 59-63. PMID: 31819263, PMCID: PMC6989044, DOI: 10.1038/s41592-019-0657-7.Peer-Reviewed Original Research
2019
Dynamic host–guest interaction enables autonomous single molecule blinking and super-resolution imaging
Sasmal R, Das Saha N, Schueder F, Joshi D, Sheeba V, Jungmann R, Agasti SS. Dynamic host–guest interaction enables autonomous single molecule blinking and super-resolution imaging. Chemical Communications 2019, 55: 14430-14433. PMID: 31737873, DOI: 10.1039/c9cc07153a.Peer-Reviewed Original ResearchSynthetic host–guest complexesReversible noncovalent interactionsHost-guest complexesHost-guest interactionsDynamic host-guest interactionsSupramolecular recognitionGuest moleculesNoncovalent interactionsSuper-resolution imagingRecognition processNanoscopicMoleculesComplexesPaintInteractionOFF stateStochastic switchingToward Absolute Molecular Numbers in DNA-PAINT.
Stein J, Stehr F, Schueler P, Blumhardt P, Schueder F, Mücksch J, Jungmann R, Schwille P. Toward Absolute Molecular Numbers in DNA-PAINT. Nano Letters 2019, 19: 8182-8190. PMID: 31535868, PMCID: PMC6856960, DOI: 10.1021/acs.nanolett.9b03546.Peer-Reviewed Original ResearchAn order of magnitude faster DNA-PAINT imaging by optimized sequence design and buffer conditions.
Schueder F, Stein J, Stehr F, Auer A, Sperl B, Strauss MT, Schwille P, Jungmann R. An order of magnitude faster DNA-PAINT imaging by optimized sequence design and buffer conditions. Nature Methods 2019, 16: 1101-1104. PMID: 31591576, DOI: 10.1038/s41592-019-0584-7.Peer-Reviewed Original ResearchBayesian Multiple Emitter Fitting using Reversible Jump Markov Chain Monte Carlo.
Fazel M, Wester MJ, Mazloom-Farsibaf H, Meddens MBM, Eklund AS, Schlichthaerle T, Schueder F, Jungmann R, Lidke KA. Bayesian Multiple Emitter Fitting using Reversible Jump Markov Chain Monte Carlo. Scientific Reports 2019, 9: 13791. PMID: 31551452, PMCID: PMC6760159, DOI: 10.1038/s41598-019-50232-x.Peer-Reviewed Original ResearchDirect Visualization of Single Nuclear Pore Complex Proteins Using Genetically-Encoded Probes for DNA-PAINT.
Schlichthaerle T, Strauss MT, Schueder F, Auer A, Nijmeijer B, Kueblbeck M, Jimenez Sabinina V, Thevathasan JV, Ries J, Ellenberg J, Jungmann R. Direct Visualization of Single Nuclear Pore Complex Proteins Using Genetically-Encoded Probes for DNA-PAINT. Angewandte Chemie (International Ed. In English) 2019, 58: 13004-13008. PMID: 31314157, PMCID: PMC6771475, DOI: 10.1002/anie.201905685.Peer-Reviewed Original Research124-Color Super-resolution Imaging by Engineering DNA-PAINT Blinking Kinetics.
Wade OK, Woehrstein JB, Nickels PC, Strauss S, Stehr F, Stein J, Schueder F, Strauss MT, Ganji M, Schnitzbauer J, Grabmayr H, Yin P, Schwille P, Jungmann R. 124-Color Super-resolution Imaging by Engineering DNA-PAINT Blinking Kinetics. Nano Letters 2019, 19: 2641-2646. PMID: 30864449, PMCID: PMC6463241, DOI: 10.1021/acs.nanolett.9b00508.Peer-Reviewed Original ResearchFlat-top TIRF illumination boosts DNA-PAINT imaging and quantification.
Stehr F, Stein J, Schueder F, Schwille P, Jungmann R. Flat-top TIRF illumination boosts DNA-PAINT imaging and quantification. Nature Communications 2019, 10: 1268. PMID: 30894522, PMCID: PMC6426843, DOI: 10.1038/s41467-019-09064-6.Peer-Reviewed Original Research
2018
Nanometer-scale Multiplexed Super-Resolution Imaging with an Economic 3D-DNA-PAINT Microscope.
Auer A, Schlichthaerle T, Woehrstein JB, Schueder F, Strauss MT, Grabmayr H, Jungmann R. Nanometer-scale Multiplexed Super-Resolution Imaging with an Economic 3D-DNA-PAINT Microscope. Chemphyschem : A European Journal Of Chemical Physics And Physical Chemistry 2018, 19: 3024-3034. PMID: 30207624, DOI: 10.1002/cphc.201800630.Peer-Reviewed Original ResearchOrganellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis.
Krahmer N, Najafi B, Schueder F, Quagliarini F, Steger M, Seitz S, Kasper R, Salinas F, Cox J, Uhlenhaut NH, Walther TC, Jungmann R, Zeigerer A, Borner GHH, Mann M. Organellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis. Developmental Cell 2018, 47: 205-221.e7. PMID: 30352176, DOI: 10.1016/j.devcel.2018.09.017.Peer-Reviewed Original ResearchTemplate-free 2D particle fusion in localization microscopy.
Heydarian H, Schueder F, Strauss MT, van Werkhoven B, Fazel M, Lidke KA, Jungmann R, Stallinga S, Rieger B. Template-free 2D particle fusion in localization microscopy. Nature Methods 2018, 15: 781-784. PMID: 30224671, DOI: 10.1038/s41592-018-0136-6.Peer-Reviewed Original ResearchSite-Specific Labeling of Affimers for DNA-PAINT Microscopy.
Schlichthaerle T, Eklund AS, Schueder F, Strauss MT, Tiede C, Curd A, Ries J, Peckham M, Tomlinson DC, Jungmann R. Site-Specific Labeling of Affimers for DNA-PAINT Microscopy. Angewandte Chemie (International Ed. In English) 2018, 57: 11060-11063. PMID: 29873161, DOI: 10.1002/anie.201804020.Peer-Reviewed Original ResearchQuantifying absolute addressability in DNA origami with molecular resolution.
Strauss MT, Schueder F, Haas D, Nickels PC, Jungmann R. Quantifying absolute addressability in DNA origami with molecular resolution. Nature Communications 2018, 9: 1600. PMID: 29686288, PMCID: PMC5913233, DOI: 10.1038/s41467-018-04031-z.Peer-Reviewed Original Research
2017
Multiplexed 3D super-resolution imaging of whole cells using spinning disk confocal microscopy and DNA-PAINT.
Schueder F, Lara-Gutiérrez J, Beliveau BJ, Saka SK, Sasaki HM, Woehrstein JB, Strauss MT, Grabmayr H, Yin P, Jungmann R. Multiplexed 3D super-resolution imaging of whole cells using spinning disk confocal microscopy and DNA-PAINT. Nature Communications 2017, 8: 2090. PMID: 29233999, PMCID: PMC5727263, DOI: 10.1038/s41467-017-02028-8.Peer-Reviewed Original ResearchProgrammable self-assembly of three-dimensional nanostructures from 10,000 unique components.
Ong LL, Hanikel N, Yaghi OK, Grun C, Strauss MT, Bron P, Lai-Kee-Him J, Schueder F, Wang B, Wang P, Kishi JY, Myhrvold C, Zhu A, Jungmann R, Bellot G, Ke Y, Yin P. Programmable self-assembly of three-dimensional nanostructures from 10,000 unique components. Nature 2017, 552: 72-77. PMID: 29219968, PMCID: PMC5786436, DOI: 10.1038/nature24648.Peer-Reviewed Original ResearchSuper-resolution microscopy with DNA-PAINT.
Schnitzbauer J, Strauss MT, Schlichthaerle T, Schueder F, Jungmann R. Super-resolution microscopy with DNA-PAINT. Nature Protocols 2017, 12: 1198-1228. PMID: 28518172, DOI: 10.1038/nprot.2017.024.Peer-Reviewed Original Research