Gut Microbiome Wellness Index 2 enhances health status prediction from gut microbiome taxonomic profiles
Chang D, Gupta V, Hur B, Cobo-López S, Cunningham K, Han N, Lee I, Kronzer V, Teigen L, Karnatovskaia L, Longbrake E, Davis J, Nelson H, Sung J. Gut Microbiome Wellness Index 2 enhances health status prediction from gut microbiome taxonomic profiles. Nature Communications 2024, 15: 7447. PMID: 39198444, PMCID: PMC11358288, DOI: 10.1038/s41467-024-51651-9.Peer-Reviewed Original ResearchConceptsMicrobiome taxonomic profilingTaxonomic profilesOpen-source command-line toolGut microbiome researchGut microbial compositionGut microbiome signaturesFecal microbiota transplantationCommand-line toolShotgun metagenomicsTaxonomic signalMicrobiome researchMicrobial compositionMicrobiome signaturesGut healthMicrobiota transplantationGutPublished datasetsMultiple diseasesAntibiotic exposureEffects of dietMetagenomicsHigh confidencePhenotypeCross-validated balanced accuracy