2019
Dynamic‐flip‐angle ECG‐gating with nuisance signal regression improves resting‐state BOLD functional connectivity mapping by reducing cardiogenic noise
Hu C, Tokoglu F, Scheinost D, Qiu M, Shen X, Peters DC, Galiana G, Constable RT. Dynamic‐flip‐angle ECG‐gating with nuisance signal regression improves resting‐state BOLD functional connectivity mapping by reducing cardiogenic noise. Magnetic Resonance In Medicine 2019, 82: 911-923. PMID: 31016782, DOI: 10.1002/mrm.27775.Peer-Reviewed Original Research
2016
Fluctuations in Global Brain Activity Are Associated With Changes in Whole-Brain Connectivity of Functional Networks
Scheinost D, Tokoglu F, Shen X, Finn ES, Noble S, Papademetris X, Constable RT. Fluctuations in Global Brain Activity Are Associated With Changes in Whole-Brain Connectivity of Functional Networks. IEEE Transactions On Biomedical Engineering 2016, 63: 2540-2549. PMID: 27541328, PMCID: PMC5180443, DOI: 10.1109/tbme.2016.2600248.Peer-Reviewed Original ResearchMeSH KeywordsAdolescentAdultAgedAlgorithmsBrainFemaleHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedModels, StatisticalNerve NetRestSignal Processing, Computer-AssistedYoung AdultConceptsGlobal brain activityResting-state networksWhole-brain connectivityBrain activityResting-state functional magnetic resonance imagingTime pointsFunctional resting-state networksFunctional magnetic resonance imagingMagnetic resonance imagingResting-state studyBrain statesRSN connectivitySensory functionSubcortical regionsResonance imagingCognitive functionCoactivation patternsUnique brain statesBrain connectivityActivity stateCritical time pointsFunctional networksSignal intensityVoxel-based methodBrain dynamics
2014
Altered functional connectivity in seizure onset zones revealed by fMRI intrinsic connectivity
Lee HW, Arora J, Papademetris X, Tokoglu F, Negishi M, Scheinost D, Farooque P, Blumenfeld H, Spencer DD, Constable RT. Altered functional connectivity in seizure onset zones revealed by fMRI intrinsic connectivity. Neurology 2014, 83: 2269-2277. PMID: 25391304, PMCID: PMC4277677, DOI: 10.1212/wnl.0000000000001068.Peer-Reviewed Original ResearchConceptsSeizure onset zoneIntrinsic connectivity contrastTemporal lobe epilepsyLobe epilepsySurgical outcomesOnset zoneExtratemporal lobe epilepsyIntractable partial epilepsyGood surgical outcomeAltered functional connectivityFunctional connectivity changesResting-state fMRIGlobal network changesEpileptic hemisphereClinical factorsPartial epilepsyEpileptogenic networksEpileptogenic zoneSeizure localizationFocal epilepsyIntracranial EEG recordingsTLE groupIndependent reviewersConnectivity abnormalitiesPatients
2013
Disruption of Functional Networks in Dyslexia: A Whole-Brain, Data-Driven Analysis of Connectivity
Finn ES, Shen X, Holahan JM, Scheinost D, Lacadie C, Papademetris X, Shaywitz SE, Shaywitz BA, Constable RT. Disruption of Functional Networks in Dyslexia: A Whole-Brain, Data-Driven Analysis of Connectivity. Biological Psychiatry 2013, 76: 397-404. PMID: 24124929, PMCID: PMC3984371, DOI: 10.1016/j.biopsych.2013.08.031.Peer-Reviewed Original ResearchMeSH KeywordsBrainBrain MappingChildDyslexiaFemaleHumansLanguage TestsMagnetic Resonance ImagingMaleNeural PathwaysSignal Processing, Computer-AssistedYoung AdultConceptsFunctional connectivity analysisVisual word form areaConnectivity analysisWord form areaNon-impaired readersFunctional magnetic resonance imaging (fMRI) dataInferior frontal gyrusWhole-brain functional connectivity analysisAnterior language regionsVisual association areasWhole-brain connectivityAdult readersNeural basisImportance of synchronyFrontal gyrusSuccessful readingVisual stimuliLanguage regionsAttention areasBrain networksDiverse brain regionsMagnetic resonance imaging dataVisual informationDyslexiaVisual properties
2012
CT‐PET weighted image fusion for separately scanned whole body rat
Suh JW, Kwon O, Scheinost D, Sinusas AJ, Cline GW, Papademetris X. CT‐PET weighted image fusion for separately scanned whole body rat. Medical Physics 2012, 39: 533-542. PMID: 22225323, PMCID: PMC3266828, DOI: 10.1118/1.3672167.Peer-Reviewed Original ResearchConceptsEmission PET imagesInput imageRegistration processMultimodal registrationRegistration methodMultiple input imagesImage fusion applicationsImage fusion techniqueDistance similarity measureNormalized mutual informationComplementary anatomic informationDeformable registration processCT imagesSeparate scannersInformative imagesPET imagesImage fusionSimilarity measureFusion techniqueHistogram matchingImage setsPositron emission tomography (PET) imagesImage characteristicsNonrigid changesMutual information
2010
New open‐source ictal SPECT analysis method implemented in BioImage Suite
Scheinost D, Teisseyre TZ, Distasio M, DeSalvo MN, Papademetris X, Blumenfeld H. New open‐source ictal SPECT analysis method implemented in BioImage Suite. Epilepsia 2010, 51: 703-707. PMID: 20074234, PMCID: PMC2963625, DOI: 10.1111/j.1528-1167.2009.02425.x.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsBrainDominance, CerebralElectroencephalographyEpilepsies, PartialHumansImage Processing, Computer-AssistedSignal Processing, Computer-AssistedSubtraction TechniqueTomography, Emission-Computed, Single-Photon