2024
Deep learning for prediction of post-thrombectomy outcomes based on admission CT angiography in large vessel occlusion stroke
Sommer J, Dierksen F, Zeevi T, Tran A, Avery E, Mak A, Malhotra A, Matouk C, Falcone G, Torres-Lopez V, Aneja S, Duncan J, Sansing L, Sheth K, Payabvash S. Deep learning for prediction of post-thrombectomy outcomes based on admission CT angiography in large vessel occlusion stroke. Frontiers In Artificial Intelligence 2024, 7: 1369702. PMID: 39149161, PMCID: PMC11324606, DOI: 10.3389/frai.2024.1369702.Peer-Reviewed Original ResearchEnd-to-endComputed tomography angiographyLarge vessel occlusionConvolutional neural networkDeep learning pipelineTrain separate modelsLogistic regression modelsResNet-50Deep learningAdmission computed tomography angiographyNeural networkLearning pipelineAdmission CT angiographyPreprocessing stepDiagnosis of large vessel occlusionsLarge vessel occlusion strokeReceiver operating characteristic areaEnsemble modelAutomated modelPre-existing morbidityCT angiographyReperfusion successNeurological examCross-validationOcclusion strokeMonte-Carlo Frequency Dropout for Predictive Uncertainty Estimation in Deep Learning
Zeevi T, Venkataraman R, Staib L, Onofrey J. Monte-Carlo Frequency Dropout for Predictive Uncertainty Estimation in Deep Learning. 2024, 00: 1-5. DOI: 10.1109/isbi56570.2024.10635511.Peer-Reviewed Original ResearchArtificial neural networkState-of-the-artMedical image dataPredictive uncertainty estimationBiomedical image dataImage dataOptimal artificial neural networkMC dropoutDropout approachSource-codeDrop-connectDeep learningNeural networkSignal spaceMonte-CarloPrediction uncertaintyUncertainty estimationDiverse setComprehensive comparisonPrediction scenariosDeepPosterior predictive distributionRepositoryDecision-makingNetwork
2023
Predicting tumor recurrence on baseline MR imaging in patients with early-stage hepatocellular carcinoma using deep machine learning
Kucukkaya A, Zeevi T, Chai N, Raju R, Haider S, Elbanan M, Petukhova-Greenstein A, Lin M, Onofrey J, Nowak M, Cooper K, Thomas E, Santana J, Gebauer B, Mulligan D, Staib L, Batra R, Chapiro J. Predicting tumor recurrence on baseline MR imaging in patients with early-stage hepatocellular carcinoma using deep machine learning. Scientific Reports 2023, 13: 7579. PMID: 37165035, PMCID: PMC10172370, DOI: 10.1038/s41598-023-34439-7.Peer-Reviewed Original Research
2022
Machine Learning Models for Classifying High- and Low-Grade Gliomas: A Systematic Review and Quality of Reporting Analysis
Bahar RC, Merkaj S, Petersen G, Tillmanns N, Subramanian H, Brim WR, Zeevi T, Staib L, Kazarian E, Lin M, Bousabarah K, Huttner AJ, Pala A, Payabvash S, Ivanidze J, Cui J, Malhotra A, Aboian MS. Machine Learning Models for Classifying High- and Low-Grade Gliomas: A Systematic Review and Quality of Reporting Analysis. Frontiers In Oncology 2022, 12: 856231. PMID: 35530302, PMCID: PMC9076130, DOI: 10.3389/fonc.2022.856231.Peer-Reviewed Original ResearchMachine learning modelsLearning modelConvolutional neural networkDeep learning studiesLarge training datasetsGrade predictionSupport vector machineApplication of MLNeural networkConventional machineVector machineTraining datasetBest performing modelCommon algorithmsModel performanceEssential metricMean prediction accuracyHigh predictive accuracyPrediction accuracyPerforming modelMachinePrediction modelDiagnosis statementsAccuracy statementsLearning studies
2021
NIMG-23. MACHINE LEARNING METHODS IN GLIOMA GRADE PREDICTION: A SYSTEMATIC REVIEW
Bahar R, Merkaj S, Brim W, Subramanian H, Zeevi T, Kazarian E, Lin M, Bousabarah K, Payabvash S, Ivanidze J, Cui J, Tocino I, Malhotra A, Aboian M. NIMG-23. MACHINE LEARNING METHODS IN GLIOMA GRADE PREDICTION: A SYSTEMATIC REVIEW. Neuro-Oncology 2021, 23: vi133-vi133. PMCID: PMC8598529, DOI: 10.1093/neuonc/noab196.523.Peer-Reviewed Original ResearchClassical machine learningConvolutional neural networkDeep learningSupport vector machineMachine learningMachine learning technologiesHigher grading accuracyMachine learning methodsArtificial intelligenceML applicationsHighest performing modelLearning technologyNeural networkMultimodal sequencesLearning methodsVector machineCommon algorithmsML methodsTCIA datasetPrimary machinePrediction accuracyGrade predictionGrading accuracyMachinePerforming modelOTHR-12. The development of machine learning algorithms for the differentiation of glioma and brain metastases – a systematic review
Brim W, Jekel L, Petersen G, Subramanian H, Zeevi T, Payabvash S, Bousabarah K, Lin M, Cui J, Brackett A, Mahajan A, Johnson M, Mahajan A, Aboian M. OTHR-12. The development of machine learning algorithms for the differentiation of glioma and brain metastases – a systematic review. Neuro-Oncology Advances 2021, 3: iii17-iii17. PMCID: PMC8351249, DOI: 10.1093/noajnl/vdab071.067.Peer-Reviewed Original ResearchConvolutional neural networkDeep learningML algorithmsMachine Learning AlgorithmsApplication of machineClassical ML algorithmsDevelopment of machineSupport vector machine algorithmVector machine algorithmArtificial intelligenceMachine learningSearch strategyDL modelsLearning algorithmFeature extractionNeural networkMachine algorithmAverage accuracyML methodsCML algorithmAlgorithmHigh accuracyLearningMachineAccuracy