Yaqing Huang
Graduate Student, Experimental Pathology Graduate ProgramAbout
Research
Publications
2026
PathwayEmbed: a computational tool to quantify intracellular signaling transduction states from transcriptomic data
Huang Y, Gerecht S, Kyriakides T, Raredon M. PathwayEmbed: a computational tool to quantify intracellular signaling transduction states from transcriptomic data. Bioinformatics 2026, 42: btag346. PMID: 42209442, PMCID: PMC13292150, DOI: 10.1093/bioinformatics/btag346.Peer-Reviewed Original Research
2025
TSP2 Deficiency Promotes Fibroblast Proliferation and Migration With Enhanced WNT4/β‐Catenin/TGFb3
Huang Y, Xing H, Tian J, Zhang D, Zhang J, Pichurin J, Lu J, Raredon M, Kyriakides T. TSP2 Deficiency Promotes Fibroblast Proliferation and Migration With Enhanced WNT4/β‐Catenin/TGFb3. The FASEB Journal 2025, 39: e71368. PMID: 41427771, DOI: 10.1096/fj.202501884r.Peer-Reviewed Original ResearchParticipant Heterogeneity of Psoriasis Interventional Trials
Kang S, Zhang D, Zhang B, Zhao C, Zhou S, Xin Y, Ruan P, Huang Y, Tian J, Lu Q. Participant Heterogeneity of Psoriasis Interventional Trials. Dermatology 2025, 241: 567-574. PMID: 40996934, DOI: 10.1159/000548168.Peer-Reviewed Reviews, Practice Guidelines, Standards, and Consensus StatementsSingle cell RNA seq reveals the pro-regenerative phenotype of thrombospondin-2 deficient dermal fibroblasts
Huang Y, Wang N, Xing H, Gao D, Hsia H, Raredon M, Kyriakides T. Single cell RNA seq reveals the pro-regenerative phenotype of thrombospondin-2 deficient dermal fibroblasts. Scientific Reports 2025, 15: 32304. PMID: 40897801, PMCID: PMC12405501, DOI: 10.1038/s41598-025-15839-3.Peer-Reviewed Original Research
2024
Targeting hypoxia and thrombospondin‐2 in diabetic wound healing
Huang Y, Xing H, Naud S, Kyriakides T. Targeting hypoxia and thrombospondin‐2 in diabetic wound healing. The FASEB Journal 2024, 38: e70091-e70091. PMID: 39383062, PMCID: PMC11486302, DOI: 10.1096/fj.202302429rrr.Peer-Reviewed Original ResearchA Flow-based Truncated Denoising Diffusion Model for super-resolution Magnetic Resonance Spectroscopic Imaging
Dong S, Cai Z, Hangel G, Bogner W, Widhalm G, Huang Y, Liang Q, You C, Kumaragamage C, Fulbright R, Mahajan A, Karbasi A, Onofrey J, de Graaf R, Duncan J. A Flow-based Truncated Denoising Diffusion Model for super-resolution Magnetic Resonance Spectroscopic Imaging. Medical Image Analysis 2024, 99: 103358. PMID: 39353335, PMCID: PMC11609020, DOI: 10.1016/j.media.2024.103358.Peer-Reviewed Original ResearchNovel muscle-derived extracellular matrix hydrogel promotes angiogenesis and neurogenesis in volumetric muscle loss
Chen Z, Huang Y, Xing H, Tseng T, Edelman H, Perry R, Kyriakides T. Novel muscle-derived extracellular matrix hydrogel promotes angiogenesis and neurogenesis in volumetric muscle loss. Matrix Biology 2024, 127: 38-47. PMID: 38325441, PMCID: PMC10958762, DOI: 10.1016/j.matbio.2024.02.001.Peer-Reviewed Original Research
2023
Author Correction: Dysregulation of TSP2-Rac1-WAVE2 axis in diabetic cells leads to cytoskeletal disorganization, increased cell stiffness, and dysfunction
Xing H, Huang Y, Kunkemoeller B, Dahl P, Muraleetharan O, Malvankar N, Murrell M, Kyriakides T. Author Correction: Dysregulation of TSP2-Rac1-WAVE2 axis in diabetic cells leads to cytoskeletal disorganization, increased cell stiffness, and dysfunction. Scientific Reports 2023, 13: 4253. PMID: 36918662, PMCID: PMC10015071, DOI: 10.1038/s41598-023-31191-w.Commentaries, Editorials and LettersIntegrated transcriptome and trajectory analysis of cutaneous T-cell lymphoma identifies putative precancer populations
Girardi M, Ren J, Qu R, Rahman N, Lewis J, King A, Liao X, Carlson K, Huang Y, Gigante S, Evans B, Rajendran B, Xu S, Wang G, Foss F, Damsky W, Kluger Y, Krishnaswamy S. Integrated transcriptome and trajectory analysis of cutaneous T-cell lymphoma identifies putative precancer populations. Blood Advances 2023, 7: 445-457. PMID: 35947128, PMCID: PMC9979716, DOI: 10.1182/bloodadvances.2022008168.Peer-Reviewed Original Research
2022
Dysregulation of TSP2-Rac1-WAVE2 axis in diabetic cells leads to cytoskeletal disorganization, increased cell stiffness, and dysfunction
Xing H, Huang Y, Kunkemoeller B, Dahl P, Muraleetharan O, Malvankar N, Murrell M, Kyriakides T. Dysregulation of TSP2-Rac1-WAVE2 axis in diabetic cells leads to cytoskeletal disorganization, increased cell stiffness, and dysfunction. Scientific Reports 2022, 12: 22474. PMID: 36577792, PMCID: PMC9797577, DOI: 10.1038/s41598-022-26337-1.Peer-Reviewed Original Research