Publications

2024

Diffusion-based Bayesian posterior distribution prediction of kinetic parameters in dynamic PETDjebra Y, Liu X, Marin T, Tiss A, Dhaynaut M, Guehl N, Johnson K, Fakhri G, Ma C, Ouyang J. Diffusion-based Bayesian posterior distribution prediction of kinetic parameters in dynamic PET. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10657955.
Tagged-to-Cine MRI Sequence Synthesis via Light Spatial-Temporal TransformerLiu X, Xing F, Bian Z, Arias-Vergara T, Pérez-Toro P, Maier A, Stone M, Zhuo J, Prince J, Woo J. Tagged-to-Cine MRI Sequence Synthesis via Light Spatial-Temporal Transformer. Lecture Notes In Computer Science 2024, 15007: 701-711. PMID: 39469302, PMCID: PMC11517403, DOI: 10.1007/978-3-031-72104-5_67.
Point-supervised Brain Tumor Segmentation with Box-prompted Medical Segment Anything ModelLiu X, Woo J, Ma C, Ouyang J, Fakhri G. Point-supervised Brain Tumor Segmentation with Box-prompted Medical Segment Anything Model. 2011 IEEE Nuclear Science Symposium Conference Record 2024, 00: 1-1. PMID: 39445308, PMCID: PMC11497479, DOI: 10.1109/nss/mic/rtsd57108.2024.10656071.
Subject-aware PET Denoising with Contrastive Adversarial Domain GeneralizationLiu X, Marin T, Eslahi S, Tiss A, Chemli Y, Johson K, Fakhri G, Ouyang J. Subject-aware PET Denoising with Contrastive Adversarial Domain Generalization. 2011 IEEE Nuclear Science Symposium Conference Record 2024, 00: 1-1. PMID: 39445307, PMCID: PMC11497478, DOI: 10.1109/nss/mic/rtsd57108.2024.10656150.
Ablation Study of Diffusion Model with Transformer Backbone for Low-count PET DenoisingHuang Y, Liu X, Miyazaki T, Omachi S, Fakhri G, Ouyang J. Ablation Study of Diffusion Model with Transformer Backbone for Low-count PET Denoising. 2011 IEEE Nuclear Science Symposium Conference Record 2024, 00: 1-2. PMID: 39445309, PMCID: PMC11497477, DOI: 10.1109/nss/mic/rtsd57108.2024.10655179.
Investigating muscle coordination patterns with Granger causality analysis in protrusive motion from tagged and diffusion MRIPark H, Xing F, Stone M, Kang H, Liu X, Zhuo J, Fels S, Reese T, Wedeen V, Fakhri G, Prince J, Woo J. Investigating muscle coordination patterns with Granger causality analysis in protrusive motion from tagged and diffusion MRI. JASA Express Letters 2024, 4: 095201. PMID: 39240196, PMCID: PMC11384280, DOI: 10.1121/10.0028500.
Diffusion Model-Based Posterior Distribution Prediction for Kinetic Parameter Estimation in Dynamic PETDjebra Y, Liu X, Marin T, Tiss A, Dhaynaut M, Guehl N, Johnson K, Fakhri G, Ma C, Ouyang J. Diffusion Model-Based Posterior Distribution Prediction for Kinetic Parameter Estimation in Dynamic PET. 2024, 00: 1-5. DOI: 10.1109/isbi56570.2024.10635805.
Exploring Backdoor Attacks in Off-the-Shelf Unsupervised Domain Adaptation for Securing Cardiac MRI-Based DiagnosisLiu X, Xing F, Gaggin H, Kuo C, El Fakhri G, Woo J. Exploring Backdoor Attacks in Off-the-Shelf Unsupervised Domain Adaptation for Securing Cardiac MRI-Based Diagnosis. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2024, 00: 1-5. PMID: 39421190, PMCID: PMC11483644, DOI: 10.1109/isbi56570.2024.10635403.
Global incidence, prevalence, years lived with disability (YLDs), disability-adjusted life-years (DALYs), and healthy life expectancy (HALE) for 371 diseases and injuries in 204 countries and territories and 811 subnational locations, 1990-2021: a systematic analysis for the Global Burden of Disease Study 2021.GBD 2021 Diseases and Injuries Collaborators. Global incidence, prevalence, years lived with disability (YLDs), disability-adjusted life-years (DALYs), and healthy life expectancy (HALE) for 371 diseases and injuries in 204 countries and territories and 811 subnational locations, 1990-2021: a systematic analysis for the Global Burden of Disease Study 2021. Lancet 2024 PMID: 38642570, DOI: 10.1016/S0140-6736(24)00757-8.
Cross noise level PET denoising with continuous adversarial domain generalizationLiu X, Eslahi S, Marin T, Tiss A, Chemli Y, Huang Y, Johnson K, Fakhri G, Ouyang J. Cross noise level PET denoising with continuous adversarial domain generalization. Physics In Medicine And Biology 2024, 69: 085001. PMID: 38484401, PMCID: PMC11195012, DOI: 10.1088/1361-6560/ad341a.
Global burden of 288 causes of death and life expectancy decomposition in 204 countries and territories and 811 subnational locations, 1990-2021: a systematic analysis for the Global Burden of Disease Study 2021GBD 2021 Causes of Death Collaborators. Global burden of 288 causes of death and life expectancy decomposition in 204 countries and territories and 811 subnational locations, 1990-2021: a systematic analysis for the Global Burden of Disease Study 2021. Lancet 2024 PMID: 38648809, DOI: 10.1016/S0140-6736(24)00824-9.
Global fertility in 204 countries and territories, 1950-2021, with forecasts to 2100: a comprehensive demographic analysis for the Global Burden of Disease Study 2021GBD 2021 Fertility and Forecasting Collaborators. Global fertility in 204 countries and territories, 1950-2021, with forecasts to 2100: a comprehensive demographic analysis for the Global Burden of Disease Study 2021. Lancet 2024 PMID: 38521087, DOI: 10.1016/S0140-6736(24)00550-6.
Global age-sex-specific mortality, life expectancy, and population estimates in 204 countries and territories and 811 subnational locations, 1950-2021, and the impact of the COVID-19 pandemic: a comprehensive demographic analysis for the Global Burden of Disease Study GBD 2021 Demographics Collaborators. Global age-sex-specific mortality, life expectancy, and population estimates in 204 countries and territories and 811 subnational locations, 1950-2021, and the impact of the COVID-19 pandemic: a comprehensive demographic analysis for the Global Burden of Disease Study 2021. Lancet 2024 PMID: 38484753, DOI: 10.1016/S0140-6736(24)00476-8.
Learn from orientation prior for radiograph super-resolution: Orientation operator transformer.Huang Y, Miyazaki T, Liu X, Jiang K, Tang Z, Omachi S. Learn from orientation prior for radiograph super-resolution: Orientation operator transformer. Comput Methods Programs Biomed 2024, 245: 108000. PMID: 38237449, DOI: 10.1016/j.cmpb.2023.108000.
A Unified Approach for Synthesizing Multimodal Brain MR Images via Gated Hybrid FusionJihoon Cho, Xiaofeng Liu, Fangxu Xing, Jinsong Ouyang, Georges El Fakhri, Jinah Park, Jonghye Woo. A Unified Approach for Synthesizing Multimodal Brain MR Images via Gated Hybrid Fusion. Annual Meeting of International Society for Magnetic Resonance in Medicine (ISMRM) 2024.
The role of 18F-FDG PET in minimizing variability in gross tumor volume delineation of soft tissue sarcomasNajem E, Marin T, Zhuo Y, Lahoud R, Tian F, Beddok A, Rozenblum L, Xing F, Moteabbed M, Lim R, Liu X, Woo J, Lostetter S, Lamane A, Chen Y, Ma C, El Fakhri G. The role of 18F-FDG PET in minimizing variability in gross tumor volume delineation of soft tissue sarcomas. Radiotherapy And Oncology 2024, 194: 110186. PMID: 38412906, PMCID: PMC11042980, DOI: 10.1016/j.radonc.2024.110186.
Subtype-Aware Dynamic Unsupervised Domain AdaptationLiu X, Xing F, You J, Lu J, Kuo C, Fakhri G, Woo J. Subtype-Aware Dynamic Unsupervised Domain Adaptation. IEEE Transactions On Neural Networks And Learning Systems 2024, 35: 2820-2834. PMID: 35895653, DOI: 10.1109/tnnls.2022.3192315.
Evaluation of few-shot detection of head and neck anatomy in CTLee, K., Cho, J., Lee, J., Xing, F., Liu, X., Bae, H., Lee, K., Hwang, J.Y., Park, J., El Fakhri, G. and Jee, K.W., 2024, April. Evaluation of few-shot detection of head and neck anatomy in CT. In SPIE Medical Imaging 2024: Computer-Aided Diagnosis (Vol. 12927, pp. 276-282).
Treatment-wise Glioblastoma survival Inference with multi-parametric preoperative MRILiu, X., Shusharina, N., Shih, H.A., Kuo, C.C.J., El Fakhri, G. and Woo, J., 2024, April. Treatment-wise glioblastoma survival Inference with multi-parametric preoperative MRI. In SPIE Medical Imaging 2024: Computer-Aided Diagnosis (Vol. 12927, pp. 593-597).
Disentangled multimodal brain MR image translation via transformer-based modality infuserCho, J., Liu, X., Xing, F., Ouyang, J., El Fakhri, G., Park, J. and Woo, J., 2024, April. Disentangled multimodal brain MR image translation via transformer-based modality infuser. In SPIE Medical Imaging 2024: Image Processing (Vol. 12926, pp. 602-607). SPIE.
Speech motion anomaly detection via cross-modal translation of 4D motion fields from tagged MRI Xiaofeng Liu, Fangxu Xing, Jiachen Zhuo, Maureen Stone, Jerry L. Prince, Georges El Fakhri, Jonghye Woo, "Speech motion anomaly detection via cross-modal translation of 4D motion fields from tagged MRI," Proc. SPIE 12926, Medical Imaging 2024: Image Processing, 129262W (1 May 2024); https://doi.org/10.1117/12.3006874
Speech motion anomaly detection via cross-modal translation of 4D motion fields from tagged MRILiu X, Xing F, Zhuo J, Stone M, Prince J, El Fakhri G, Woo J. Speech motion anomaly detection via cross-modal translation of 4D motion fields from tagged MRI. Proceedings Of SPIE--the International Society For Optical Engineering 2024, 12926: 129262w-129262w-5. PMID: 39238547, PMCID: PMC11377028, DOI: 10.1117/12.3006874.
Development and validation of deep-learning network for detecting congenital heart disease from multi-view multi-modal transthoracic echocardiogramsMingmei Cheng, Jing Wang, Xiaofeng Liu, Yanzhong Wang, Qun Wu, Fangyun Wang, Pei Li, Binbin Wang, Xin Zhang, Wanqing xie. Development and validation of deep-learning network for detecting congenital heart disease from multi-view multi-modal transthoracic echocardiograms. Research. 0:DOI:10.34133/research.0319
A Unified Approach for Synthesizing Multimodal Brain MR Images via Gated Hybrid FusionJ Cho, X Liu, F Xing, J Ouyang, G El Fakhri, J Park, J Woo. A Unified Approach for Synthesizing Multimodal Brain MR Images via Gated Hybrid Fusion. Annual Meeting of International Society for Magnetic Resonance in Medicine (ISMRM) 2024

2023

Deep learning based lesions detection and severity grading of small bowel Crohn's disease ulcers on double-balloon endoscopy images.Xie W, Hu J, Liang P, Mei Q, Wang A, Liu Q, Liu X, Wu J, Yang X, Zhu N, Bai B, Mei Y, Liang Z, Han W, Cheng M. Deep learning based lesions detection and severity grading of small bowel Crohn's disease ulcers on double-balloon endoscopy images. Gastrointest Endosc 2023 PMID: 38065509, DOI: 10.1016/j.gie.2023.11.059.
Source-free domain adaptive segmentation with class-balanced complementary self-training.Huang Y, Xie W, Li M, Xiao E, You J, Liu X. Source-free domain adaptive segmentation with class-balanced complementary self-training. Artif Intell Med 2023, 146: 102694. PMID: 38042612, DOI: 10.1016/j.artmed.2023.102694.
Incremental Learning for Heterogeneous Structure Segmentation in Brain Tumor MRILiu X, Shih H, Xing F, Santarnecchi E, El Fakhri G, Woo J. Incremental Learning for Heterogeneous Structure Segmentation in Brain Tumor MRI. Lecture Notes In Computer Science 2023, 14221: 46-56. PMID: 38665992, PMCID: PMC11045038, DOI: 10.1007/978-3-031-43895-0_5.
Speech Audio Synthesis from Tagged MRI and Non-negative Matrix Factorization via Plastic TransformerLiu X, Xing F, Stone M, Zhuo J, Fels S, Prince J, El Fakhri G, Woo J. Speech Audio Synthesis from Tagged MRI and Non-negative Matrix Factorization via Plastic Transformer. Lecture Notes In Computer Science 2023, 14226: 435-445. PMID: 38651032, PMCID: PMC11034915, DOI: 10.1007/978-3-031-43990-2_41.
Attentive continuous generative self-training for unsupervised domain adaptive medical image translationLiu X, Prince J, Xing F, Zhuo J, Reese T, Stone M, El Fakhri G, Woo J. Attentive continuous generative self-training for unsupervised domain adaptive medical image translation. Medical Image Analysis 2023, 88: 102851. PMID: 37329854, PMCID: PMC10527936, DOI: 10.1016/j.media.2023.102851.
Successive Subspace Learning for Cardiac Disease Classification with Two-Phase Deformation Fields from Cine MRILiu X, Xing F, Gaggin H, Kuo C, El Fakhri G, Woo J. Successive Subspace Learning for Cardiac Disease Classification with Two-Phase Deformation Fields from Cine MRI. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2023, 00: 1-5. PMID: 38031559, PMCID: PMC10686280, DOI: 10.1109/isbi53787.2023.10230746.
Noise-Robust Sleep Staging via Adversarial Training With an Auxiliary ModelYoo C, Liu X, Xing F, Fakhri G, Woo J, Kang J. Noise-Robust Sleep Staging via Adversarial Training With an Auxiliary Model. IEEE Transactions On Biomedical Engineering 2023, 70: 1252-1263. PMID: 36227815, DOI: 10.1109/tbme.2022.3214269.
Synthesizing audio from tongue motion during speech using tagged MRI via transformerLiu X, Xing F, Prince J, Stone M, Fakhri G, Woo J. Synthesizing audio from tongue motion during speech using tagged MRI via transformer. Proceedings Of SPIE--the International Society For Optical Engineering 2023, 12464: 1246410-1246410-5. PMID: 38009135, PMCID: PMC10669779, DOI: 10.1117/12.2653345.
Outlier Robust Disease Classification via Stochastic Confidence NetworkLee K, Lee H, El Fakhri G, Sepulcre J, Liu X, Xing F, Hwang J, Woo J. Outlier Robust Disease Classification via Stochastic Confidence Network. Lecture Notes In Computer Science 2023, 14394: 80-90. DOI: 10.1007/978-3-031-47425-5_8.
Speech Audio Synthesis from Tagged MRI and Non-Negative Matrix Factorization via Plastic TransformerLiu X, Xing F, Stone M, Zhuo J, Fels S, Prince JL, El Fakhri G, Woo J. Speech audio synthesis from tagged mri and non-negative matrix factorization via plastic transformer. InInternational Conference on Medical Image Computing and Computer-Assisted Intervention 2023 Oct 1 (pp. 435-445). Cham: Springer Nature Switzerland.
FDG PET decreases intra-and inter-observer variabilities in GTV delineation of soft tissue sarcomas in radiotherapy planning when used in conjunction with CT and MR.Najem E, Marin T, Lahoud RM, Tian F, Xing F, Moteabbed M, Zhuo Y, Lim R, Liu X, Woo J, Mao C. FDG PET decreases intra-and inter-observer variabilities in GTV delineation of soft tissue sarcomas in radiotherapy planning when used in conjunction with CT and MR. Journal of Nuclear Medicine. June 2023, 64 (supplement 1) P119;
Granger causality analysis of internal tongue muscles in tongue protrusion from diffusion and tagged MRIPark H, Xing F, Stone M, Liu X, Zhuo J, Fels S, Reese T, Wedeen V, El Fakhri G, Prince JL, Woo J. Granger causality analysis of internal tongue muscles in tongue protrusion from diffusion and tagged MRI. The Journal of the Acoustical Society of America. 2023 Mar 1;153(3_supplement):A369-.
Vicinal Feature Statistics Augmentation for Federated 3D Medical Volume SegmentationHuang Y, Xie W, Li M, Cheng M, Wu J, Wang W, You J, Liu X. Vicinal Feature Statistics Augmentation for Federated 3D Medical Volume Segmentation. InInternational Conference on Information Processing in Medical Imaging 2023 Jun 8 (pp. 360-371). Cham: Springer Nature Switzerland.
Bias and Fairness in Chatbots: An OverviewXue J, Wang YC, Wei C, Liu X, Woo J, Kuo CC. Bias and Fairness in Chatbots: An Overview. APSIPA Transactions on Signal and Information Processing. 2023;13(2).
Global Burden of Cardiovascular Diseases and RisksGBD-NHLBI-JACC Global Burden of Cardiovascular Diseases Writing Group (X Liu et al.,). Global Burden of Cardiovascular Diseases and Risks, 1990-2022. Journal Of The American College Of Cardiology 2023, 82: 2350-2473. PMID: 38092509, DOI: 10.1016/j.jacc.2023.11.007.

2022

Multimodal fusion diagnosis of depression and anxiety based on CNN-LSTM model.Xie W, Wang C, Lin Z, Luo X, Chen W, Xu M, Liang L, Liu X, Wang Y, Luo H, Cheng M. Multimodal fusion diagnosis of depression and anxiety based on CNN-LSTM model. Comput Med Imaging Graph 2022, 102: 102128. PMID: 36272311, DOI: 10.1016/j.compmedimag.2022.102128.
Posterior estimation using deep learning: a simulation study of compartmental modeling in dynamic positron emission tomographyLiu X, Marin T, Amal T, Woo J, Fakhri G, Ouyang J. Posterior estimation using deep learning: a simulation study of compartmental modeling in dynamic positron emission tomography. Medical Physics 2022, 50: 1539-1548. PMID: 36331429, PMCID: PMC10087283, DOI: 10.1002/mp.16078.
Assessment of Transcatheter or Surgical Closure of Atrial Septal Defect using Interpretable Deep Keypoint Stadiometry.Wang J, Xie W, Cheng M, Wu Q, Wang F, Li P, Fan B, Zhang X, Wang B, Liu X. Assessment of Transcatheter or Surgical Closure of Atrial Septal Defect using Interpretable Deep Keypoint Stadiometry. Research (Wash D C) 2022, 2022: 9790653. PMID: 36340508, DOI: 10.34133/2022/9790653.
Memory consistent unsupervised off-the-shelf model adaptation for source-relaxed medical image segmentationLiu X, Xing F, El Fakhri G, Woo J. Memory consistent unsupervised off-the-shelf model adaptation for source-relaxed medical image segmentation. Medical Image Analysis 2022, 83: 102641. PMID: 36265264, PMCID: PMC10016738, DOI: 10.1016/j.media.2022.102641.
Tagged-MRI Sequence to Audio Synthesis via Self Residual Attention Guided Heterogeneous TranslatorLiu X, Xing F, Prince J, Zhuo J, Stone M, El Fakhri G, Woo J. Tagged-MRI Sequence to Audio Synthesis via Self Residual Attention Guided Heterogeneous Translator. Lecture Notes In Computer Science 2022, 13436: 376-386. PMID: 36820764, PMCID: PMC9942274, DOI: 10.1007/978-3-031-16446-0_36.
ACT: Semi-supervised Domain-Adaptive Medical Image Segmentation with Asymmetric Co-trainingLiu X, Xing F, Shusharina N, Lim R, Jay Kuo C, El Fakhri G, Woo J. ACT: Semi-supervised Domain-Adaptive Medical Image Segmentation with Asymmetric Co-training. Lecture Notes In Computer Science 2022, 13435: 66-76. PMID: 36780245, PMCID: PMC9911133, DOI: 10.1007/978-3-031-16443-9_7.
Feasibility study of clinical target volume definition for soft-tissue sarcoma using muscle fiber orientations derived from diffusion tensor imagingShusharina N, Liu X, Coll-Font J, Foster A, Fakhri G, Woo J, Bortfeld T, Nguyen C. Feasibility study of clinical target volume definition for soft-tissue sarcoma using muscle fiber orientations derived from diffusion tensor imaging. Physics In Medicine And Biology 2022, 67: 155013. PMID: 35817048, PMCID: PMC9344976, DOI: 10.1088/1361-6560/ac8045.
Brain MR Atlas Construction Using Symmetric Deep Neural InpaintingXing F, Liu X, Kuo C, Fakhri G, Woo J. Brain MR Atlas Construction Using Symmetric Deep Neural Inpainting. IEEE Journal Of Biomedical And Health Informatics 2022, 26: 3185-3196. PMID: 35139030, PMCID: PMC9250592, DOI: 10.1109/jbhi.2022.3149754.
Ordinal Unsupervised Domain Adaptation With Recursively Conditional Gaussian Imposed Variational Disentanglement.Liu X, Li S, Ge Y, Ye P, You J, Lu J. Ordinal Unsupervised Domain Adaptation With Recursively Conditional Gaussian Imposed Variational Disentanglement. IEEE Trans Pattern Anal Mach Intell 2022, PP PMID: 35704544, DOI: 10.1109/TPAMI.2022.3183115.
Unsupervised Black-Box Model Domain Adaptation for Brain Tumor SegmentationLiu X, Yoo C, Xing F, Kuo C, Fakhri G, Kang J, Woo J. Unsupervised Black-Box Model Domain Adaptation for Brain Tumor Segmentation. Frontiers In Neuroscience 2022, 16: 837646. PMID: 35720708, PMCID: PMC9201342, DOI: 10.3389/fnins.2022.837646.
Cmri2spec: Cine MRI Sequence to Spectrogram Synthesis via A Pairwise Heterogeneous TranslatorLiu X, Xing F, Stone M, Prince J, Kim J, El Fakhri G, Woo J. Cmri2spec: Cine MRI Sequence to Spectrogram Synthesis via A Pairwise Heterogeneous Translator. 2013 IEEE International Conference On Acoustics, Speech And Signal Processing 2022, 00: 1481-1485. PMID: 36212702, PMCID: PMC9544268, DOI: 10.1109/icassp43922.2022.9746381.
Variational inference for quantifying inter-observer variability in segmentation of anatomical structuresLiu X, Xing F, Marin T, Fakhri G, Woo J. Variational inference for quantifying inter-observer variability in segmentation of anatomical structures. Proceedings Of SPIE--the International Society For Optical Engineering 2022, 12032: 120321m-120321m-6. PMID: 36303579, PMCID: PMC9603619, DOI: 10.1117/12.2604547.
Unsupervised domain adaptation for segmentation with black-box source modelLiu X, Yoo C, Xing F, Kuo C, El Fakhri G, Kang J, Woo J. Unsupervised domain adaptation for segmentation with black-box source model. Proceedings Of SPIE--the International Society For Optical Engineering 2022, 12032: 1203210-1203210-6. PMID: 35983176, PMCID: PMC9385170, DOI: 10.1117/12.2607895.
Structure-aware unsupervised tagged-to-cine MRI synthesis with self disentanglementLiu X, Xing F, Prince J, Stone M, El Fakhri G, Woo J. Structure-aware unsupervised tagged-to-cine MRI synthesis with self disentanglement. Proceedings Of SPIE--the International Society For Optical Engineering 2022, 12032: 120321q-120321q-7. PMID: 36203947, PMCID: PMC9533681, DOI: 10.1117/12.2610655.
Measuring strain in diffusion-weighted data using tagged magnetic resonance imagingXing F, Liu X, Reese T, Stone M, Wedeen V, Prince J, El Fakhri G, Woo J. Measuring strain in diffusion-weighted data using tagged magnetic resonance imaging. Proceedings Of SPIE--the International Society For Optical Engineering 2022, 12032: 1203205-1203205-7. PMID: 36777787, PMCID: PMC9911263, DOI: 10.1117/12.2610989.
VoxelHop: Successive Subspace Learning for ALS Disease Classification Using Structural MRILiu X, Xing F, Yang C, Kuo C, Babu S, Fakhri G, Jenkins T, Woo J. VoxelHop: Successive Subspace Learning for ALS Disease Classification Using Structural MRI. IEEE Journal Of Biomedical And Health Informatics 2022, 26: 1128-1139. PMID: 34339378, PMCID: PMC8807766, DOI: 10.1109/jbhi.2021.3097735.
Self-Semantic Contour Adaptation for Cross Modality Brain Tumor SegmentationLiu X, Xing F, Fakhri G, Woo J. Self-Semantic Contour Adaptation for Cross Modality Brain Tumor Segmentation. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2022, 00: 1-5. PMID: 35990931, PMCID: PMC9387767, DOI: 10.1109/isbi52829.2022.9761629.
Interpreting Depression From Question-Wise Long-Term Video Recording of SDS Evaluation.Xie W, Liang L, Lu Y, Wang C, Shen J, Luo H, Liu X. Interpreting Depression From Question-Wise Long-Term Video Recording of SDS Evaluation. IEEE J Biomed Health Inform 2022, 26: 865-875. PMID: 34170837, DOI: 10.1109/JBHI.2021.3092628.
Deep Unsupervised Domain Adaptation: A Review of Recent Advances and PerspectivesLiu X, Yoo C, Xing F, Oh H, Fakhri G, Kang J, Woo J. Deep Unsupervised Domain Adaptation: A Review of Recent Advances and Perspectives. APSIPA Transactions On Signal And Information Processing 2022, 11: e25. DOI: 10.1561/116.00000192.
Adversarial Non-local Multi-modality MRI Aggregation for Directional DWI SynthesisX Liu, F Xing, VJ Wedeen, G El Fakhri, J Woo. Adversarial Non-local Multi-modality MRI Aggregation for Directional DWI Synthesis. Annual Meeting of International Society for Magnetic Resonance in Medicine (ISMRM) 2022.
Constraining Pseudo-label in Self-training Unsupervised Domain Adaptation with Energy-based ModelKong L, Hu B, Liu X, Lu J, You J, Liu X. Constraining pseudo‐label in self‐training unsupervised domain adaptation with energy‐based model. International Journal of Intelligent Systems. 2022 Oct;37(10):8092-112.
Learn Complementary Pseudo-label for Source-free Domain Adaptive Medical SegmentationXie W, Li M, Wu J, Huang Y, Bu Y, You J, Liu X. Learn complementary pseudo-label for source-free domain adaptive medical segmentation. InProc. NeurIPS Workshops 2022.
Sleep Analysis for Fatigue of Crewmembers with Deep Multi-Task LearningLiu X, Li Y, Wang X, Xie W, Liu X, Xun X. Sleep Analysis for Fatigue of Crewmembers with Deep Multi-Task Learning. In2022 IEEE 4th International Conference on Civil Aviation Safety and Information Technology (ICCASIT) 2022 Oct 12 (pp. 670-674).

2021

Deep learning-based GTV contouring modeling inter- and intra- observer variability in sarcomasMarin T, Zhuo Y, Lahoud R, Tian F, Ma X, Xing F, Moteabbed M, Liu X, Grogg K, Shusharina N, Woo J, Lim R, Ma C, Chen Y, El Fakhri G. Deep learning-based GTV contouring modeling inter- and intra- observer variability in sarcomas. Radiotherapy And Oncology 2021, 167: 269-276. PMID: 34808228, PMCID: PMC8934266, DOI: 10.1016/j.radonc.2021.09.034.
4D magnetic resonance imaging atlas construction using temporally aligned audio waveforms in speechXing F, Jin R, Gilbert I, Perry J, Sutton B, Liu X, Fakhri G, Shosted R, Woo J. 4D magnetic resonance imaging atlas construction using temporally aligned audio waveforms in speech. The Journal Of The Acoustical Society Of America 2021, 150: 3500-3508. PMID: 34852570, PMCID: PMC8580575, DOI: 10.1121/10.0007064.
Segmentation of Cardiac Structures via Successive Subspace Learning with Saab Transform from Cine MRILiu X, Xing F, Gaggin H, Wang W, Kuo C, Fakhri G, Woo J. Segmentation of Cardiac Structures via Successive Subspace Learning with Saab Transform from Cine MRI. Annual International Conference Of The IEEE Engineering In Medicine And Biology Society (EMBC) 2021, 00: 3535-3538. PMID: 34892002, DOI: 10.1109/embc46164.2021.9629770.
Deep 3D-CNN for Depression Diagnosis with Facial Video Recording of Self-Rating Depression Scale Questionnaire.Xie W, Liang L, Lu Y, Luo H, Liu X. Deep 3D-CNN for Depression Diagnosis with Facial Video Recording of Self-Rating Depression Scale Questionnaire. Annu Int Conf IEEE Eng Med Biol Soc 2021, 2021: 2007-2010. PMID: 34891681, DOI: 10.1109/EMBC46164.2021.9630412.
Adversarial Unsupervised Domain Adaptation with Conditional and Label Shift: Infer, Align and IterateLiu X, Guo Z, Li S, Xing F, You J, Kuo C, Fakhri G, Woo J. Adversarial Unsupervised Domain Adaptation with Conditional and Label Shift: Infer, Align and Iterate. 2021, 00: 10347-10356. DOI: 10.1109/iccv48922.2021.01020.
Adapting Off-the-Shelf Source Segmenter for Target Medical Image SegmentationLiu X, Xing F, Yang C, El Fakhri G, Woo J. Adapting Off-the-Shelf Source Segmenter for Target Medical Image Segmentation. Lecture Notes In Computer Science 2021, 12902: 549-559. PMID: 34734216, PMCID: PMC8562716, DOI: 10.1007/978-3-030-87196-3_51.
Generative Self-training for Cross-Domain Unsupervised Tagged-to-Cine MRI SynthesisLiu X, Xing F, Stone M, Zhuo J, Reese T, Prince J, El Fakhri G, Woo J. Generative Self-training for Cross-Domain Unsupervised Tagged-to-Cine MRI Synthesis. Lecture Notes In Computer Science 2021, 12903: 138-148. PMID: 34734217, PMCID: PMC8562649, DOI: 10.1007/978-3-030-87199-4_13.
Domain Generalization under Conditional and Label Shifts via Variational Bayesian InferenceLiu X, Hu B, Jin L, Han X, Xing F, Ouyang J, Lu J, El Fakhri G, Woo J. Domain Generalization under Conditional and Label Shifts via Variational Bayesian Inference. 2021, 881-887. DOI: 10.24963/ijcai.2021/122.
Dual-Cycle Constrained Bijective Vae-Gan For Tagged-To-Cine Magnetic Resonance Image SynthesisLiu X, Xing F, Prince J, Carass A, Stone M, Fakhri G, Woo J. Dual-Cycle Constrained Bijective Vae-Gan For Tagged-To-Cine Magnetic Resonance Image Synthesis. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2021, 00: 1448-1452. PMID: 34707796, PMCID: PMC8547333, DOI: 10.1109/isbi48211.2021.9433852.
A Unified Conditional Disentanglement Framework For Multimodal Brain Mr Image TranslationLiu X, Xing F, Fakhri G, Woo J. A Unified Conditional Disentanglement Framework For Multimodal Brain Mr Image Translation. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2021, 00: 10-14. PMID: 34567419, PMCID: PMC8460116, DOI: 10.1109/isbi48211.2021.9433897.
Automated interpretation of congenital heart disease from multi-view echocardiograms.Wang J, Liu X, Wang F, Zheng L, Gao F, Zhang H, Zhang X, Xie W, Wang B. Automated interpretation of congenital heart disease from multi-view echocardiograms. Med Image Anal 2021, 69: 101942. PMID: 33418465, DOI: 10.1016/j.media.2020.101942.
Symmetric-Constrained Irregular Structure Inpainting for Brain MRI Registration with Tumor PathologyLiu X, Xing F, Yang C, Kuo C, El Fakhri G, Woo J. Symmetric-Constrained Irregular Structure Inpainting for Brain MRI Registration with Tumor Pathology. Lecture Notes In Computer Science 2021, 12658: 80-91. PMID: 34013242, PMCID: PMC8130838, DOI: 10.1007/978-3-030-72084-1_8.
Floor-of-the-mouth muscle function analysis using dynamic magnetic resonance imagingXing F, Stone M, Prince J, Liu X, Fakhri G, Woo J. Floor-of-the-mouth muscle function analysis using dynamic magnetic resonance imaging. Proceedings Of SPIE--the International Society For Optical Engineering 2021, 11596: 115961p-115961p-7. PMID: 34012189, PMCID: PMC8130842, DOI: 10.1117/12.2581484.
Energy-constrained Self-training for Unsupervised Domain AdaptationLiu X, Hu B, Liu X, Lu J, You J, Kong L. Energy-constrained self-training for unsupervised domain adaptation. In 25th International Conference on Pattern Recognition (ICPR). 2021 Jan 10 (pp. 7515-7520).
Identity-aware Facial Expression Recognition in Compressed VideoLiu X, Jin L, Han X, Lu J, You J, Kong L. Identity-aware facial expression recognition in compressed video. In 25th International Conference on Pattern Recognition (ICPR) 2021 Jan 10 (pp. 7508-7514).
Temporal Frame Alignment for Speech Atlas Construction Using High Speed Dynamic MRIXing F, Jin R, Liu X, El Fakhri G, Perry J, Sutton B, Woo J. Temporal frame alignment for speech atlas construction using high speed dynamic MRI. InISMRM & SMRT Annual Meeting 2021 May.
Successive Subspace Learning for ALS Disease Classification Using T2-weighted MRILiu X, Xing F, Yang C, Kuo CC, Babu S, El Fakhri G, Jenkins T, Woo J. Successive Subspace Learning for ALS Disease Classification Using T2-weighted MRI. Annual Meeting of International Society for Magnetic Resonance in Medicine (ISMRM). 2021
Deep Verifier Networks: Verification of Deep Discriminative Models with Deep Generative ModelsChe T, Liu X, Li S, Ge Y, Zhang R, Xiong C, Bengio Y. Deep verifier networks: Verification of deep discriminative models with deep generative models. In Proceedings of the AAAI Conference on Artificial Intelligence 2021 May 18 (Vol. 35, No. 8, pp. 7002-7010).
Subtype-aware Unsupervised Domain Adaptation for Medical DiagnosisLiu X, Liu X, Hu B, Ji W, Xing F, Lu J, You J, Kuo CC, El Fakhri G, Woo J. Subtype-aware unsupervised domain adaptation for medical diagnosis. In Proceedings of the AAAI Conference on Artificial Intelligence 2021 May 18 (Vol. 35, No. 3, pp. 2189-2197).
Embedding Semantic Hierarchy in Discrete Optimal Transport for Risk MinimizationGe Y, Li S, Li X, Fan F, Xie W, You J, Liu X. Embedding semantic hierarchy in discrete optimal transport for risk minimization. InICASSP 2021-2021 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) 2021 Jun 6 (pp. 2835-2839).
Rethinking the Invariant Feature Learning: Variational Bayesian Inference for Domain GeneralizationLiu X, Hu B, Jin L, Han X, Lu FX, Woo GE. Rethinking the Invariant Feature Learning: Variational Bayesian Inference for Domain Generalization. In Proceedings of the Thirtieth International Joint Conference on Artificial Intelligence 2021 (pp. 881-882).
BACO: A Background Knowledge-and Content-Based Framework for Citing Sentence GenerationGe Y, Dinh L, Liu X, Su J, Lu Z, Wang A, Diesner J. BACO: A background knowledge-and content-based framework for citing sentence generation. In Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing (Volume 1: Long Papers) 2021 Aug (pp. 1466-1478).
Mutual Information Regularized Identity-aware Facial Expression Recognition in Compressed VideoLiu X, Jin L, Han X, You J. Mutual information regularized identity-aware facial expression recognition in compressed video. Pattern Recognition. 2021 Nov 1;119:108105.
Posterior Estimation for Dynamic PET imaging using Conditional Variational InferenceLiu X, Marin T, Amal T, Woo J, Fakhri GE, Ouyang J. Posterior Estimation for Dynamic PET imaging using Conditional Variational Inference. IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS&MIC). 2023 Oct 24.
Muscle strain analysis from diffusion tractography and dynamic magnetic resonance imaging of the moving tongueXing F, Liu X, Reese T, Stone M, Wedeen V, Prince JL, El Fakhri G, Woo J. Muscle strain analysis from diffusion tractography and dynamic magnetic resonance imaging of the moving tongue. The Journal of the Acoustical Society of America. 2021 Oct;150(4):A190-.
Inducing Semantic Hierarchy Structure in Empirical Risk Minimization with Optimal Transport MeasuresXie W, Ge Y, Li S, Li M, Li X, Guo Z, You J, Liu X. Inducing semantic hierarchy structure in empirical risk minimization with optimal transport measures. Neurocomputing. 2023 Apr 14;530:1-0.

2020

Severity-Aware Semantic Segmentation with Reinforced Wasserstein TrainingLiu X, Ji W, You J, Fakhri G, Woo J. Severity-Aware Semantic Segmentation with Reinforced Wasserstein Training. 2020, 00: 12563-12572. DOI: 10.1109/cvpr42600.2020.01258.
Unimodal Regularized Neuron Stick-breaking for Ordinal ClassificationLiu X, Fan F, Kong L, Diao Z, Xie W, Lu J, You J. Unimodal regularized neuron stick-breaking for ordinal classification. Neurocomputing. 2020 May 7;388:34-44.
Wasserstein loss-based deep object detectionHan Y, Liu X, Sheng Z, Ren Y, Han X, You J, Liu R, Luo Z. Wasserstein loss-based deep object detection. In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops 2020 (pp. 998-999).
Image2audio: Facilitating semi-supervised audio emotion recognition with facial expression imageHe G, Liu X, Fan F, You J. Image2audio: Facilitating semi-supervised audio emotion recognition with facial expression image. InProceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops 2020 (pp. 912-913).
Classification-aware semi-supervised domain adaptationHe G, Liu X, Fan F, You J. Classification-aware semi-supervised domain adaptation. In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops 2020 (pp. 964-965).
Importance-Aware Semantic Segmentation in Self-Driving with Discrete Wasserstein TrainingLiu X, Han Y, Bai S, Ge Y, Wang T, Han X, Li S, You J, Lu J. Importance-aware semantic segmentation in self-driving with discrete wasserstein training. InProceedings of the AAAI Conference on Artificial Intelligence 2020 Apr 3 (Vol. 34, No. 07, pp. 11629-11636).
Disentanglement for discriminative visual recognitionLiu X. Disentanglement for discriminative visual recognition. Recognition and Perception of Images: Fundamentals and Applications. 2021 Mar 5:143-87.
Severity-aware semantic segmentation with reinforced wasserstein trainingLiu X, Ji W, You J, Fakhri GE, Woo J. Severity-aware semantic segmentation with reinforced wasserstein training. InProceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition 2020 (pp. 12566-12575).
AUTO3D: Novel view synthesis through unsupervisely learned variational viewpoint and global 3D representationLiu X, Che T, Lu Y, Yang C, Li S, You J. Auto3d: Novel view synthesis through unsupervisely learned variational viewpoint and global 3d representation. InEuropean Conference on Computer Vision 2020 Aug 23 (pp. 52-71). Cham: Springer International Publishing.
Wasserstein loss with alternative reinforcement learning for severity-aware semantic segmentationLiu X, Lu Y, Liu X, Bai S, Li S, You J. Wasserstein loss with alternative reinforcement learning for severity-aware semantic segmentation. IEEE Transactions on Intelligent Transportation Systems. 2020 Sep 10;23(1):587-96.
Research on Precision Thermal Control Technology Based on Aerial Telefocal Common Aperture Photoelectric PlatformSun L, Cheng Z, Li L, Liu F, Liu X, Hu R. Research on Precision Thermal Control Technology Based on Aerial Telefocal Common Aperture Photoelectric Platform. Optik. Volume 224, December 2020, 165462.
Global brain and tongue atrophy in ALS via deformation-based voxel analysis from T2-weighted structural MRIXing F, Liu X, Babu S, El Fakhri G, Jenkins T, Woo J. Global brain and tongue atrophy in ALS via deformation-based voxel analysis from T2-weighted structural MRI. 31st International Symposium on ALS/MND. 2020

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