2016
Faster permutation inference in brain imaging
Winkler AM, Ridgway GR, Douaud G, Nichols TE, Smith SM. Faster permutation inference in brain imaging. NeuroImage 2016, 141: 502-516. PMID: 27288322, PMCID: PMC5035139, DOI: 10.1016/j.neuroimage.2016.05.068.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsBrainComputer SimulationData Interpretation, StatisticalHumansImage EnhancementImage Interpretation, Computer-AssistedModels, StatisticalNeuroimagingReproducibility of ResultsSensitivity and SpecificityConceptsGamma distributionPermutation distributionProperties of statisticsReal data exampleInexpensive computing powerLinear modelGeneralised Pareto distributionMatrix theoryTail approximationNegative binomial distributionSymmetric errorsPareto distributionDirect fittingFamily-wise error ratePermutation inferenceReference resultsComplex modelsBinomial distributionReal dataSynthetic dataExact error rateComputing powerGeneral linear modelFamilywise errorNull hypothesisA comprehensive tractography study of patients with bipolar disorder and their unaffected siblings
Sprooten E, Barrett J, McKay DR, Knowles EE, Mathias SR, Winkler AM, Brumbaugh MS, Landau S, Cyr L, Kochunov P, Glahn DC. A comprehensive tractography study of patients with bipolar disorder and their unaffected siblings. Human Brain Mapping 2016, 37: 3474-3485. PMID: 27198848, PMCID: PMC5496097, DOI: 10.1002/hbm.23253.Peer-Reviewed Original ResearchMeSH KeywordsAdultAlgorithmsBipolar DisorderBrainComorbidityDiffusion Magnetic Resonance ImagingDiffusion Tensor ImagingFemaleGenetic Predisposition to DiseaseHumansImage Interpretation, Computer-AssistedMaleNeural PathwaysOrgan SizePattern Recognition, AutomatedPsychiatric Status Rating ScalesSeverity of Illness IndexSiblingsYoung Adult
2015
The common genetic influence over processing speed and white matter microstructure: Evidence from the Old Order Amish and Human Connectome Projects
Kochunov P, Thompson P, Winkler A, Morrissey M, Fu M, Coyle T, Du X, Muellerklein F, Savransky A, Gaudiot C, Sampath H, Eskandar G, Jahanshad N, Patel B, Rowland L, Nichols T, O'Connell J, Shuldiner A, Mitchell B, Hong L. The common genetic influence over processing speed and white matter microstructure: Evidence from the Old Order Amish and Human Connectome Projects. NeuroImage 2015, 125: 189-197. PMID: 26499807, PMCID: PMC4691385, DOI: 10.1016/j.neuroimage.2015.10.050.Peer-Reviewed Original ResearchMeSH KeywordsAdolescentAdultAgedAmishAnisotropyBrainBrain MappingCognitionDiffusion Tensor ImagingFemaleGenotypeHumansImage Interpretation, Computer-AssistedMaleMiddle AgedPhenotypeRegistriesWhite MatterYoung Adult
2013
Transcriptomics of cortical gray matter thickness decline during normal aging
Kochunov P, Charlesworth J, Winkler A, Hong LE, Nichols TE, Curran JE, Sprooten E, Jahanshad N, Thompson PM, Johnson MP, Kent JW, Landman BA, Mitchell B, Cole SA, Dyer TD, Moses EK, Goring HH, Almasy L, Duggirala R, Olvera RL, Glahn DC, Blangero J. Transcriptomics of cortical gray matter thickness decline during normal aging. NeuroImage 2013, 82: 273-283. PMID: 23707588, PMCID: PMC3759649, DOI: 10.1016/j.neuroimage.2013.05.066.Peer-Reviewed Original ResearchMeSH KeywordsAdultAgedAged, 80 and overAgingCerebral CortexGene Expression ProfilingHumansImage Interpretation, Computer-AssistedMagnetic Resonance ImagingMiddle AgedTranscriptomeConceptsPathway enrichment analysisTranscriptome dataInnate immune pathwaysEnrichment analysisCellular proliferationInnate immune response pathwaysImmune pathwaysImmune response pathwaysResponse pathwaysFunctional categoriesPathway enrichmentTranscriptional activityGenesExpression activityTranscriptsHigh-resolution T1-weighted MRINormal cerebral agingCommunity-dwelling membersPathwaySignificance thresholdRegenerative capacityT1-weighted MRIDifferentiationCerebral agingViral infection
2012
Measuring and comparing brain cortical surface area and other areal quantities
Winkler AM, Sabuncu MR, Yeo BT, Fischl B, Greve DN, Kochunov P, Nichols TE, Blangero J, Glahn DC. Measuring and comparing brain cortical surface area and other areal quantities. NeuroImage 2012, 61: 1428-1443. PMID: 22446492, PMCID: PMC3641659, DOI: 10.1016/j.neuroimage.2012.03.026.Peer-Reviewed Original Research
2010
Genetics of microstructure of cerebral white matter using diffusion tensor imaging
Kochunov P, Glahn DC, Lancaster JL, Winkler AM, Smith S, Thompson PM, Almasy L, Duggirala R, Fox PT, Blangero J. Genetics of microstructure of cerebral white matter using diffusion tensor imaging. NeuroImage 2010, 53: 1109-1116. PMID: 20117221, PMCID: PMC2888778, DOI: 10.1016/j.neuroimage.2010.01.078.Peer-Reviewed Original Research
2009
Cortical thickness or grey matter volume? The importance of selecting the phenotype for imaging genetics studies
Winkler AM, Kochunov P, Blangero J, Almasy L, Zilles K, Fox PT, Duggirala R, Glahn DC. Cortical thickness or grey matter volume? The importance of selecting the phenotype for imaging genetics studies. NeuroImage 2009, 53: 1135-1146. PMID: 20006715, PMCID: PMC2891595, DOI: 10.1016/j.neuroimage.2009.12.028.Peer-Reviewed Original ResearchAdultAgedAged, 80 and overBrainBrain MappingFemaleHumansImage Interpretation, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedPedigreePhenotypeQuantitative Trait, Heritable