Multi-modal Imaging, Neuroinformatics, & Data Science (MINDS) Laboratory
Department of Radiology & Biomedical Imaging
Our research center is located in The Anlyan Center (TAC) at Yale University in New Haven, CT. Our research group comprises academics and clinicians spanning physics, psychiatry, neuroscience, and biology, but the focus of the group is on new functional magnetic resonance imaging (fMRI) methods, primarily encompassing functional connectivity, multiscale analysis, machine learning, statistical benchmarking, and software development. Active topics of investigation include: individualized parcellation, connectivity-based predictive modeling (CPM), methodology reproducibility, and web-based software development.
Recent Publications
- Brain age prediction and deviations from normative trajectories in the neonatal connectome.Sun H, Mehta S, Khaitova M, Cheng B, Hao X, Spann M, Scheinost D. Nat Commun. 2024 Nov 26; 2024 Nov 26. PMID: 39592647.
- Applying fetal, infant, and toddler (FIT) neuroimaging to understand mental health.Spann MN, Scheinost D. Neuropsychopharmacology. 2024 Nov. PMID: 39117902.
- Brain-phenotype predictions of language and executive function can survive across diverse real-world data: Dataset shifts in developmental populations.Adkinson BD, Rosenblatt M, Dadashkarimi J, Tejavibulya L, Jiang R, Noble S, Scheinost D. Dev Cogn Neurosci. 2024 Oct 16; 2024 Oct 16. PMID: 39447452.
- Prediction of craving across studies: A commentary on conceptual and methodological considerations when using data-driven methods.Antons S, Yip SW, Lacadie CM, Dadashkarimi J, Scheinost D, Brand M, Potenza MN. J Behav Addict. 2024 Oct 4; 2024 Oct 1. PMID: 39356557.
- Power and reproducibility in the external validation of brain-phenotype predictions.Rosenblatt M, Tejavibulya L, Sun H, Camp CC, Khaitova M, Adkinson BD, Jiang R, Westwater ML, Noble S, Scheinost D. Nat Hum Behav. 2024 Oct; 2024 Jul 31. PMID: 39085406.
- Variation in moment-to-moment brain state engagement changes across development and contributes to individual differences in executive function.Ye J, Tejavibulya L, Dai W, Cope LM, Hardee JE, Heitzeg MM, Lichenstein S, Yip SW, Banaschewski T, Baker GJ, Bokde ALW, Brühl R, Desrivières S, Flor H, Gowland P, Grigis A, Heinz A, Martinot JL, Paillère Martinot ML, Artiges E, Nees F, Orfanos DP, Poustka L, Hohmann S, Holz N, Baeuchl C, Smolka MN, Vaidya N, Walter H, Whelan R, Schumann G, Garavan H, Chaarani B, Gee DG, Baskin-Sommers A, Casey BJ, Scheinost D. bioRxiv. 2024 Sep 11; 2024 Sep 11. PMID: 39314397.
- Network state dynamics underpin basal craving in a transdiagnostic population.Ye J, Garrison KA, Lacadie C, Potenza MN, Sinha R, Goldfarb EV, Scheinost D. Mol Psychiatry. 2024 Aug 25; 2024 Aug 25. PMID: 39183336.
- Brain states as wave-like motifs.Foster M, Scheinost D. Trends Cogn Sci. 2024 Jun; 2024 Apr 5. PMID: 38582654.
- Mapping Early Brain-Body Interactions: Associations of Fetal Heart Rate Variation with Newborn Brainstem, Hypothalamic, and Dorsal Anterior Cingulate Cortex Functional Connectivity.Pollatou A, Holland CM, Stockton TJ, Peterson BS, Scheinost D, Monk C, Spann MN. J Neurosci. 2024 May 29; 2024 May 29. PMID: 38604780.
- The brain structure, inflammatory, and genetic mechanisms mediate the association between physical frailty and depression.Jiang R, Noble S, Rosenblatt M, Dai W, Ye J, Liu S, Qi S, Calhoun VD, Sui J, Scheinost D. Nat Commun. 2024 May 23; 2024 May 23. PMID: 38782943.
- Connectome caricatures: removing large-amplitude co-activation patterns in resting-state fMRI emphasizes individual differences.Rodriguez RX, Noble S, Camp CC, Scheinost D. bioRxiv. 2024 Apr 11; 2024 Apr 11. PMID: 38645002.
- Correction: The effects of experience of discrimination and acculturation during pregnancy on the developing offspring brain.Spann MN, Alleyne K, Holland CM, Davids A, Pierre-Louis A, Bang C, Oyeneye V, Kiflom R, Shea E, Cheng B, Peterson BS, Monk C, Scheinost D. Neuropsychopharmacology. 2024 Mar. PMID: 38212444.
- Data leakage inflates prediction performance in connectome-based machine learning models.Rosenblatt M, Tejavibulya L, Jiang R, Noble S, Scheinost D. Nat Commun. 2024 Feb 28; 2024 Feb 28. PMID: 38418819.
- Investigating brain dynamics and their association with cognitive control in opioid use disorder using naturalistic and drug cue paradigms.Ye J, Mehta S, Peterson H, Ibrahim A, Saeed G, Linsky S, Kreinin I, Tsang S, Nwanaji-Enwerem U, Raso A, Arora J, Tokoglu F, Yip SW, Alice Hahn C, Lacadie C, Greene AS, Constable RT, Barry DT, Redeker NS, Yaggi H, Scheinost D. medRxiv. 2024 Feb 27; 2024 Feb 27. PMID: 38464297.
- "It's all connected:" A mixed methods study of insomnia, stigma, and discrimination among individuals on medication for opioid use disorder.Nwanaji-Enwerem U, Sadler LS, O'Connell M, Barry D, Knobf TM, Jeon S, Scheinost D, Yaggi K, Redeker NS. Sleep Health. 2024 Feb; 2023 Nov 18. PMID: 37980246.
- Brain-phenotype predictions can survive across diverse real-world data.Adkinson BD, Rosenblatt M, Dadashkarimi J, Tejavibulya L, Jiang R, Noble S, Scheinost D. bioRxiv. 2024 Jan 24; 2024 Jan 24. PMID: 38328100.
- The effects of experience of discrimination and acculturation during pregnancy on the developing offspring brain.Spann MN, Alleyne K, Holland CM, Davids A, Pierre-Louis A, Bang C, Oyeneye V, Kiflom R, Shea E, Cheng B, Peterson BS, Monk C, Scheinost D. Neuropsychopharmacology. 2024 Jan; 2023 Nov 15. PMID: 37968451.
- Test-Retest Reliability of Functional Connectivity in Adolescents With Depression.Camp CC, Noble S, Scheinost D, Stringaris A, Nielson DM. Biol Psychiatry Cogn Neurosci Neuroimaging. 2024 Jan; 2023 Sep 19. PMID: 37734478.
- The effects of data leakage on connectome-based machine learning models.Rosenblatt M, Tejavibulya L, Jiang R, Noble S, Scheinost D. bioRxiv. 2023 Dec 28; 2023 Dec 28. PMID: 38234740.
- Connectome-based prediction of craving in gambling disorder and cocaine use disorder.Antons S, Yip SW, Lacadie CM, Dadashkarimi J, Scheinost D, Brand M, Potenza MN. Dialogues Clin Neurosci. 2023 Dec. PMID: 37190759.
- Autism spectrum disorder-specific changes in white matter connectome edge density based on functionally defined nodes.Weber CF, Lake EMR, Haider SP, Mozayan A, Bobba PS, Mukherjee P, Scheinost D, Constable RT, Ment L, Payabvash S. Front Neurosci. 2023; 2023 Nov 23. PMID: 38075286.
- Impact of postnatal weight gain on brain white matter maturation in very preterm infants.Bobba PS, Weber CF, Higaki ARA, Mukherjee P, Scheinost D, Constable RT, Ment L, Taylor SN, Payabvash S. J Neuroimaging. 2023 Nov-Dec; 2023 Jul 22. PMID: 37483073.
- Power and reproducibility in the external validation of brain-phenotype predictions.Rosenblatt M, Tejavibulya L, Camp CC, Jiang R, Westwater ML, Noble S, Scheinost D. bioRxiv. 2023 Oct 30; 2023 Oct 30. PMID: 37961654.
- Network state dynamics underpin craving in a transdiagnostic population.Ye J, Garrison KA, Lacadie C, Potenza MN, Sinha R, Goldfarb EV, Scheinost D. medRxiv. 2023 Oct 3; 2023 Oct 3. PMID: 37873309.
- Altered Brain Dynamics Across Bipolar Disorder and Schizophrenia During Rest and Task Switching Revealed by Overlapping Brain States.Ye J, Sun H, Gao S, Dadashkarimi J, Rosenblatt M, Rodriguez RX, Mehta S, Jiang R, Noble S, Westwater ML, Scheinost D. Biol Psychiatry. 2023 Oct 1; 2023 Apr 7. PMID: 37031780.
- Network controllability of structural connectomes in the neonatal brain.Sun H, Jiang R, Dai W, Dufford AJ, Noble S, Spann MN, Gu S, Scheinost D. Nat Commun. 2023 Sep 19; 2023 Sep 19. PMID: 37726267.
- Gradient-based enhancement attacks in biomedical machine learning.Rosenblatt M, Dadashkarimi J, Scheinost D. ArXiv. 2023 Aug 16; 2023 Aug 16. PMID: 36713237.
- The challenges and prospects of brain-based prediction of behaviour.Wu J, Li J, Eickhoff SB, Scheinost D, Genon S. Nat Hum Behav. 2023 Aug; 2023 Jul 31. PMID: 37524932.
- Cross Atlas Remapping via Optimal Transport (CAROT): Creating connectomes for different atlases when raw data is not available.Dadashkarimi J, Karbasi A, Liang Q, Rosenblatt M, Noble S, Foster M, Rodriguez R, Adkinson B, Ye J, Sun H, Camp C, Farruggia M, Tejavibulya L, Dai W, Jiang R, Pollatou A, Scheinost D. Med Image Anal. 2023 Aug; 2023 Jun 8. PMID: 37352650.
- Connectome-based machine learning models are vulnerable to subtle data manipulations.Rosenblatt M, Rodriguez RX, Westwater ML, Dai W, Horien C, Greene AS, Constable RT, Noble S, Scheinost D. Patterns (N Y). 2023 Jul 14; 2023 May 15. PMID: 37521052.
- Elevated C-reactive protein mediates the liver-brain axis: a preliminary study.Jiang R, Wu J, Rosenblatt M, Dai W, Rodriguez RX, Sui J, Qi S, Liang Q, Xu B, Meng Q, Calhoun VD, Scheinost D. EBioMedicine. 2023 Jul; 2023 Jun 23. PMID: 37356206.
- Why is everyone talking about brain state?Greene AS, Horien C, Barson D, Scheinost D, Constable RT. Trends Neurosci. 2023 Jul; 2023 May 8. PMID: 37164869.
- A functional connectome signature of blood pressure in >30 000 participants from the UK biobank.Jiang R, Calhoun VD, Noble S, Sui J, Liang Q, Qi S, Scheinost D. Cardiovasc Res. 2023 Jun 13. PMID: 35875865.
- Associations of physical frailty with health outcomes and brain structure in 483 033 middle-aged and older adults: a population-based study from the UK Biobank.Jiang R, Noble S, Sui J, Yoo K, Rosenblatt M, Horien C, Qi S, Liang Q, Sun H, Calhoun VD, Scheinost D. Lancet Digit Health. 2023 Jun; 2023 Apr 14. PMID: 37061351.
- Transdiagnostic Connectome-Based Prediction of Craving.Garrison KA, Sinha R, Potenza MN, Gao S, Liang Q, Lacadie C, Scheinost D. Am J Psychiatry. 2023 Jun 1; 2023 Mar 29. PMID: 36987598.
- Machine Learning and Prediction in Fetal, Infant, and Toddler Neuroimaging: A Review and Primer.Scheinost D, Pollatou A, Dufford AJ, Jiang R, Farruggia MC, Rosenblatt M, Peterson H, Rodriguez RX, Dadashkarimi J, Liang Q, Dai W, Foster ML, Camp CC, Tejavibulya L, Adkinson BD, Sun H, Ye J, Cheng Q, Spann MN, Rolison M, Noble S, Westwater ML. Biol Psychiatry. 2023 May 15; 2022 Oct 29. PMID: 36759257.
- An Opportunity to Increase Collaborative Science in Fetal, Infant, and Toddler Neuroimaging.Korom M, Catalina Camacho M, Ford A, Taha H, Scheinost D, Spann M, Vaughn KA. Biol Psychiatry. 2023 May 15; 2022 Jul 21. PMID: 35987717.
- A generalizable connectome-based marker of in-scan sustained attention in neurodiverse youth.Horien C, Greene AS, Shen X, Fortes D, Brennan-Wydra E, Banarjee C, Foster R, Donthireddy V, Butler M, Powell K, Vernetti A, Mandino F, O'Connor D, Lake EMR, McPartland JC, Volkmar FR, Chun M, Chawarska K, Rosenberg MD, Scheinost D, Constable RT. Cereb Cortex. 2023 May 9. PMID: 36573438.
- Sex differences in default mode network connectivity in healthy aging adults.Ficek-Tani B, Horien C, Ju S, Xu W, Li N, Lacadie C, Shen X, Scheinost D, Constable T, Fredericks C. Cereb Cortex. 2023 May 9. PMID: 36563018.
- Functional brain networks reflect spatial and temporal autocorrelation.Shinn M, Hu A, Turner L, Noble S, Preller KH, Ji JL, Moujaes F, Achard S, Scheinost D, Constable RT, Krystal JH, Vollenweider FX, Lee D, Anticevic A, Bullmore ET, Murray JD. Nat Neurosci. 2023 May; 2023 Apr 24. PMID: 37095399.
- Predicting depressed and elevated mood symptomatology in bipolar disorder using brain functional connectomes.Sankar A, Shen X, Colic L, Goldman DA, Villa LM, Kim JA, Pittman B, Scheinost D, Constable RT, Blumberg HP. Psychol Med. 2023 Mar 9; 2023 Mar 9. PMID: 36891769.
- Population level multimodal neuroimaging correlates of attention-deficit hyperactivity disorder among children.Lin H, Haider SP, Kaltenhauser S, Mozayan A, Malhotra A, Constable RT, Scheinost D, Ment LR, Konrad K, Payabvash S. Front Neurosci. 2023; 2023 Feb 22. PMID: 36908780.
- A graph theory neuroimaging approach to distinguish the depression of bipolar disorder from major depressive disorder in adolescents and young adults.Goldman DA, Sankar A, Rich A, Kim JA, Pittman B, Constable RT, Scheinost D, Blumberg HP. J Affect Disord. 2022 Dec 15; 2022 Sep 12. PMID: 36103935.
- Leveraging edge-centric networks complements existing network-level inference for functional connectomes.Rodriguez RX, Noble S, Tejavibulya L, Scheinost D. Neuroimage. 2022 Dec 1; 2022 Nov 8. PMID: 36368501.
- Functional Connectome-Based Predictive Modeling in Autism.Horien C, Floris DL, Greene AS, Noble S, Rolison M, Tejavibulya L, O'Connor D, McPartland JC, Scheinost D, Chawarska K, Lake EMR, Constable RT. Biol Psychiatry. 2022 Oct 15; 2022 Apr 25. PMID: 35690495.
- Age-related topographic map of magnetic resonance diffusion metrics in neonatal brains.Bobba PS, Weber CF, Mak A, Mozayan A, Malhotra A, Sheth KN, Taylor SN, Vossough A, Grant PE, Scheinost D, Constable RT, Ment LR, Payabvash S. Hum Brain Mapp. 2022 Oct 1; 2022 May 23. PMID: 35599634.
- Hypoconnectivity between anterior insula and amygdala associates with future vulnerabilities in social development in a neurodiverse sample of neonates.Scheinost D, Chang J, Lacadie C, Brennan-Wydra E, Foster R, Boxberger A, Macari S, Vernetti A, Constable RT, Ment LR, Chawarska K. Sci Rep. 2022 Sep 28; 2022 Sep 28. PMID: 36171268.
- Associations between grip strength, brain structure, and mental health in > 40,000 participants from the UK Biobank.Jiang R, Westwater ML, Noble S, Rosenblatt M, Dai W, Qi S, Sui J, Calhoun VD, Scheinost D. BMC Med. 2022 Sep 9; 2022 Sep 9. PMID: 36076200.
- Age-dependent white matter microstructural disintegrity in autism spectrum disorder.Weber CF, Lake EMR, Haider SP, Mozayan A, Mukherjee P, Scheinost D, Bamford NS, Ment L, Constable T, Payabvash S. Front Neurosci. 2022; 2022 Sep 7. PMID: 36161157.
- Brain-phenotype models fail for individuals who defy sample stereotypes.Greene AS, Shen X, Noble S, Horien C, Hahn CA, Arora J, Tokoglu F, Spann MN, Carrión CI, Barron DS, Sanacora G, Srihari VH, Woods SW, Scheinost D, Constable RT. Nature. 2022 Sep; 2022 Aug 24. PMID: 36002572.
- Arousal impacts distributed hubs modulating the integration of brain functional connectivity.Lee K, Horien C, O'Connor D, Garand-Sheridan B, Tokoglu F, Scheinost D, Lake EMR, Constable RT. Neuroimage. 2022 Sep; 2022 Jun 9. PMID: 35690257.
- Associations among Household and Neighborhood Socioeconomic Disadvantages, Resting-state Frontoamygdala Connectivity, and Internalizing Symptoms in Youth.Ip KI, Sisk LM, Horien C, Conley MI, Rapuano KM, Rosenberg MD, Greene AS, Scheinost D, Constable RT, Casey BJ, Baskin-Sommers A, Gee DG. J Cogn Neurosci. 2022 Sep 1. PMID: 35104356.
- A cognitive state transformation model for task-general and task-specific subsystems of the brain connectome.Yoo K, Rosenberg MD, Kwon YH, Scheinost D, Constable RT, Chun MM. Neuroimage. 2022 Aug 15; 2022 May 13. PMID: 35577026.
- Improving power in functional magnetic resonance imaging by moving beyond cluster-level inference.Noble S, Mejia AF, Zalesky A, Scheinost D. Proc Natl Acad Sci U S A. 2022 Aug 9; 2022 Aug 4. PMID: 35925887.
- A Neuroimaging Signature of Cognitive Aging from Whole-Brain Functional Connectivity.Jiang R, Scheinost D, Zuo N, Wu J, Qi S, Liang Q, Zhi D, Luo N, Chung YC, Liu S, Xu Y, Sui J, Calhoun V. Adv Sci (Weinh). 2022 Aug; 2022 Jul 10. PMID: 35811304.
- Predicting the future of neuroimaging predictive models in mental health.Tejavibulya L, Rolison M, Gao S, Liang Q, Peterson H, Dadashkarimi J, Farruggia MC, Hahn CA, Noble S, Lichenstein SD, Pollatou A, Dufford AJ, Scheinost D. Mol Psychiatry. 2022 Aug; 2022 Jun 13. PMID: 35697759.
- High-Risk Drinkers Engage Distinct Stress-Predictive Brain Networks.Goldfarb EV, Scheinost D, Fogelman N, Seo D, Sinha R. Biol Psychiatry Cogn Neurosci Neuroimaging. 2022 Aug; 2022 Mar 7. PMID: 35272096.
- Functional connectivity for the language network in the developing brain: 30 weeks of gestation to 30 months of age.Scheinost D, Chang J, Lacadie C, Brennan-Wydra E, Constable RT, Chawarska K, Ment LR. Cereb Cortex. 2022 Jul 21. PMID: 34875024.
- Functional Connectivity of the Chemosenses: A Review.Farruggia MC, Pellegrino R, Scheinost D. Front Syst Neurosci. 2022; 2022 Jun 22. PMID: 35813269.
- (Un)common space in infant neuroimaging studies: A systematic review of infant templates.Dufford AJ, Hahn CA, Peterson H, Gini S, Mehta S, Alfano A, Scheinost D. Hum Brain Mapp. 2022 Jun 15; 2022 Mar 9. PMID: 35261126.
- A graph theory-based whole brain approach to assess mood state differences in adolescents and young adults with bipolar disorder.Goldman DA, Sankar A, Colic L, Villa L, Kim JA, Pittman B, Constable RT, Scheinost D, Blumberg HP. Bipolar Disord. 2022 Jun; 2021 Nov 1. PMID: 34665907.
- Large-scale differences in functional organization of left- and right-handed individuals using whole-brain, data-driven analysis of connectivity.Tejavibulya L, Peterson H, Greene A, Gao S, Rolison M, Noble S, Scheinost D. Neuroimage. 2022 May 15; 2022 Mar 8. PMID: 35272202.
- Multimodal neuroimaging of metabotropic glutamate 5 receptors and functional connectivity in alcohol use disorder.Smart K, Worhunsky PD, Scheinost D, Angarita GA, Esterlis I, Carson RE, Krystal JH, O'Malley SS, Cosgrove KP, Hillmer AT. Alcohol Clin Exp Res. 2022 May; 2022 Apr 21. PMID: 35342968.
- An ode to fetal, infant, and toddler neuroimaging: Chronicling early clinical to research applications with MRI, and an introduction to an academic society connecting the field.Pollatou A, Filippi CA, Aydin E, Vaughn K, Thompson D, Korom M, Dufford AJ, Howell B, Zöllei L, Martino AD, Graham A, Scheinost D, Spann MN. Dev Cogn Neurosci. 2022 Apr; 2022 Feb 7. PMID: 35184026.
- A protocol for working with open-source neuroimaging datasets.Horien C, Lee K, Westwater ML, Noble S, Tejavibulya L, Kayani T, Constable RT, Scheinost D. STAR Protoc. 2022 Mar 18; 2022 Jan 8. PMID: 35036958.
- Atypical Intrinsic Hemispheric Interaction Associated with Autism Spectrum Disorder Is Present within the First Year of Life.Rolison M, Lacadie C, Chawarska K, Spann M, Scheinost D. Cereb Cortex. 2022 Mar 4. PMID: 34424949.
- Genetic variation in endocannabinoid signaling is associated with differential network-level functional connectivity in youth.Sisk LM, Rapuano KM, Conley MI, Greene AS, Horien C, Rosenberg MD, Scheinost D, Constable RT, Glatt CE, Casey BJ, Gee DG. J Neurosci Res. 2022 Mar; 2021 Sep 8. PMID: 34496065.
- Dear reviewers: Responses to common reviewer critiques about infant neuroimaging studies.Korom M, Camacho MC, Filippi CA, Licandro R, Moore LA, Dufford A, Zöllei L, Graham AM, Spann M, Howell B, Shultz S, Scheinost D. Dev Cogn Neurosci. 2022 Feb; 2021 Dec 27. PMID: 34974250.
- Large-scale functional brain networks of maladaptive childhood aggression identified by connectome-based predictive modeling.Ibrahim K, Noble S, He G, Lacadie C, Crowley MJ, McCarthy G, Scheinost D, Sukhodolsky DG. Mol Psychiatry. 2022 Feb; 2021 Oct 25. PMID: 34690348.
- Graph theory analysis of whole brain functional connectivity to assess disturbances associated with suicide attempts in bipolar disorder.Sankar A, Scheinost D, Goldman DA, Drachman R, Colic L, Villa LM, Kim JA, Gonzalez Y, Marcelo I, Shinomiya M, Pittman B, Lacadie CM, Oquendo MA, Constable RT, Blumberg HP. Transl Psychiatry. 2022 Jan 10; 2022 Jan 10. PMID: 35013103.
- Neurofeedback-guided kinesthetic motor imagery training in Parkinson's disease: Randomized trial.Tinaz S, Kamel S, Aravala SS, Elfil M, Bayoumi A, Patel A, Scheinost D, Sinha R, Hampson M. Neuroimage Clin. 2022; 2022 Mar 2. PMID: 35247729.
- Automated Brain Masking of Fetal Functional MRI with Open Data.Rutherford S, Sturmfels P, Angstadt M, Hect J, Wiens J, van den Heuvel MI, Scheinost D, Sripada C, Thomason M. Neuroinformatics. 2022 Jan; 2021 Jun 15. PMID: 34129169.
- BrainGNN: Interpretable Brain Graph Neural Network for fMRI Analysis.Li X, Zhou Y, Dvornek N, Zhang M, Gao S, Zhuang J, Scheinost D, Staib LH, Ventola P, Duncan JS. Med Image Anal. 2021 Dec; 2021 Sep 12. PMID: 34655865.
- How prenatal exposures shape the infant brain: Insights from infant neuroimaging studies.Dufford AJ, Spann M, Scheinost D. Neurosci Biobehav Rev. 2021 Dec; 2021 Sep 15. PMID: 34536461.
- The instability of functional connectomes across the first year of life.Dufford AJ, Noble S, Gao S, Scheinost D. Dev Cogn Neurosci. 2021 Oct; 2021 Aug 17. PMID: 34419767.
- Nonlinear manifold learning in functional magnetic resonance imaging uncovers a low-dimensional space of brain dynamics.Gao S, Mishne G, Scheinost D. Hum Brain Mapp. 2021 Oct 1; 2021 Jun 29. PMID: 34184812.
- Smooth graph learning for functional connectivity estimation.Gao S, Xia X, Scheinost D, Mishne G. Neuroimage. 2021 Oct 1; 2021 Jun 23. PMID: 34171497.
- Using functional connectivity models to characterize relationships between working and episodic memory.Stark GF, Avery EW, Rosenberg MD, Greene AS, Gao S, Scheinost D, Todd Constable R, Chun MM, Yoo K. Brain Behav. 2021 Aug; 2021 Jun 17. PMID: 34142458.
- Resample aggregating improves the generalizability of connectome predictive modeling.O'Connor D, Lake EMR, Scheinost D, Constable RT. Neuroimage. 2021 Aug 1; 2021 Apr 10. PMID: 33848621.
- A guide to the measurement and interpretation of fMRI test-retest reliability.Noble S, Scheinost D, Constable RT. Curr Opin Behav Sci. 2021 Aug; 2021 Jan 20. PMID: 33585666.
- Dissociable neural substrates of opioid and cocaine use identified via connectome-based modelling.Lichenstein SD, Scheinost D, Potenza MN, Carroll KM, Yip SW. Mol Psychiatry. 2021 Aug; 2019 Nov 12. PMID: 31719641.
- Author Correction: Simultaneous cortex-wide fluorescence Ca(2+) imaging and whole-brain fMRI.Lake EMR, Ge X, Shen X, Herman P, Hyder F, Cardin JA, Higley MJ, Scheinost D, Papademetris X, Crair MC, Constable RT. Nat Methods. 2021 Jul. PMID: 34163088.
- Big data approaches to identifying sex differences in long-term memory.Tejavibulya L, Scheinost D. Cogn Neurosci. 2021 Jul-Oct; 2020 Dec 24. PMID: 33356847.
- Functional connectivity during frustration: a preliminary study of predictive modeling of irritability in youth.Scheinost D, Dadashkarimi J, Finn ES, Wambach CG, MacGillivray C, Roule AL, Niendam TA, Pine DS, Brotman MA, Leibenluft E, Tseng WL. Neuropsychopharmacology. 2021 Jun; 2021 Jan 21. PMID: 33479511.
- Transdiagnostic, Connectome-Based Prediction of Memory Constructs Across Psychiatric Disorders.Barron DS, Gao S, Dadashkarimi J, Greene AS, Spann MN, Noble S, Lake EMR, Krystal JH, Constable RT, Scheinost D. Cereb Cortex. 2021 Mar 31. PMID: 33345271.
- Corrigendum to "Behavioral and brain signatures of substance use vulnerability in childhood" [Developmental Cognitive Neuroscience 46 (December) (2020) 100878].Rapuano KM, Rosenberg MD, Maza MT, Dennis NJ, Dorji M, Greene AS, Horien C, Scheinost D, Todd Constable R, Casey BJ. Dev Cogn Neurosci. 2021 Feb; 2020 Dec 9. PMID: 33309003.
- A hitchhiker's guide to working with large, open-source neuroimaging datasets.Horien C, Noble S, Greene AS, Lee K, Barron DS, Gao S, O'Connor D, Salehi M, Dadashkarimi J, Shen X, Lake EMR, Constable RT, Scheinost D. Nat Hum Behav. 2021 Feb; 2020 Dec 7. PMID: 33288916.
- Low-motion fMRI data can be obtained in pediatric participants undergoing a 60-minute scan protocol.Horien C, Fontenelle S 4th, Joseph K, Powell N, Nutor C, Fortes D, Butler M, Powell K, Macris D, Lee K, Greene AS, McPartland JC, Volkmar FR, Scheinost D, Chawarska K, Constable RT. Sci Rep. 2020 Dec 14; 2020 Dec 14. PMID: 33318557.
- Behavioral and brain signatures of substance use vulnerability in childhood.Rapuano KM, Rosenberg MD, Maza MT, Dennis NJ, Dorji M, Greene AS, Horien C, Scheinost D, Todd Constable R, Casey BJ. Dev Cogn Neurosci. 2020 Dec; 2020 Nov 3. PMID: 33181393.
- Simultaneous cortex-wide fluorescence Ca(2+) imaging and whole-brain fMRI.Lake EMR, Ge X, Shen X, Herman P, Hyder F, Cardin JA, Higley MJ, Scheinost D, Papademetris X, Crair MC, Constable RT. Nat Methods. 2020 Dec; 2020 Nov 2. PMID: 33139894.
- Association of Maternal Prepregnancy Body Mass Index With Fetal Growth and Neonatal Thalamic Brain Connectivity Among Adolescent and Young Women.Spann MN, Scheinost D, Feng T, Barbato K, Lee S, Monk C, Peterson BS. JAMA Netw Open. 2020 Nov 2; 2020 Nov 2. PMID: 33141162.
- Association of Prefrontal-Striatal Functional Pathology With Alcohol Abstinence Days at Treatment Initiation and Heavy Drinking After Treatment Initiation.Blaine SK, Wemm S, Fogelman N, Lacadie C, Seo D, Scheinost D, Sinha R. Am J Psychiatry. 2020 Nov 1; 2020 Aug 28. PMID: 32854534.
- The Constrained Network-Based Statistic: A New Level of Inference for Neuroimaging.Noble S, Scheinost D. Med Image Comput Comput Assist Interv. 2020 Oct; 2020 Sep 29. PMID: 33870336.
- Magnetic resonance image connectivity analysis provides evidence of central nervous system mode of action for parasacral transcutaneous electro neural stimulation - A pilot study.Netto JMB, Scheinost D, Onofrey JA, Franco I. J Pediatr Urol. 2020 Oct; 2020 Aug 13. PMID: 32873504.
- Functional brain connectivity in ex utero premature infants compared to in utero fetuses.De Asis-Cruz J, Kapse K, Basu SK, Said M, Scheinost D, Murnick J, Chang T, du Plessis A, Limperopoulos C. Neuroimage. 2020 Oct 1; 2020 Jun 11. PMID: 32534962.
- How Tasks Change Whole-Brain Functional Organization to Reveal Brain-Phenotype Relationships.Greene AS, Gao S, Noble S, Scheinost D, Constable RT. Cell Rep. 2020 Aug 25. PMID: 32846124.
- Identification of a brain fingerprint for overweight and obesity.Farruggia MC, van Kooten MJ, Perszyk EE, Burke MV, Scheinost D, Constable RT, Small DM. Physiol Behav. 2020 Aug 1; 2020 May 14. PMID: 32417645.
- Toward Addiction Prediction: An Overview of Cross-Validated Predictive Modeling Findings and Considerations for Future Neuroimaging Research.Yip SW, Kiluk B, Scheinost D. Biol Psychiatry Cogn Neurosci Neuroimaging. 2020 Aug; 2019 Nov 12. PMID: 31932230.
- Associations between different dimensions of prenatal distress, neonatal hippocampal connectivity, and infant memory.Scheinost D, Spann MN, McDonough L, Peterson BS, Monk C. Neuropsychopharmacology. 2020 Jul; 2020 Apr 18. PMID: 32305039.
- Randomized, Sham-Controlled Trial of Real-Time Functional Magnetic Resonance Imaging Neurofeedback for Tics in Adolescents With Tourette Syndrome.Sukhodolsky DG, Walsh C, Koller WN, Eilbott J, Rance M, Fulbright RK, Zhao Z, Bloch MH, King R, Leckman JF, Scheinost D, Pittman B, Hampson M. Biol Psychiatry. 2020 Jun 15; 2019 Aug 13. PMID: 31668476.
Principal Investigator
Dustin Scheinost, PhD, BS
Associate Professor of Radiology and Biomedical Imaging
Contact Information
300 Cedar St, New Haven, CT 06519 - The Anlyan Center - Magnetic Resonance Research Center