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Joseph Craft, MD

Paul B. Beeson Professor of Medicine (Rheumatology) and Professor of Immunobiology
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Additional Titles

Paul B. Beeson Professor of Medicine, Internal Medicine: Rheumatology

Program Director, Investigative Medicine, Internal Medicine: Rheumatology

About

Titles

Paul B. Beeson Professor of Medicine (Rheumatology) and Professor of Immunobiology

Paul B. Beeson Professor of Medicine, Internal Medicine: Rheumatology; Program Director, Investigative Medicine, Internal Medicine: Rheumatology

Biography

Dr. Craft is an AOA graduate of the University of North Carolina School of Medicine. He did medical and immunology training at Yale and is Paul B. Beeson Professor of Medicine and Professor of Immunobiology. His laboratory is devoted to understanding host responses to pathogen challenge and in autoimmunity. His lab was among the four that dissected the transcriptional regulation of T follicular helper cells, a finding listed among the most significant discoveries in T cell development by the journal Nature. He and his lab members have made sentinel discoveries defining targets of the immune response in lupus and the role of T cells in dissecting mechanisms of T cell-mediated tissue damage in autoimmunity. He was Chief of the Section of Rheumatology at Yale for 28 years, and now directs the Yale Colton Center for Autoimmunity. He has trained over 40 postdoctoral fellows, 26 PhD and MD/PhD students, and mentored 12 NIH K grant recipients. Dr. Craft has directed the Investigative Medicine MD to PhD program at Yale for over 20 years, training over 70 MD/PhD students. He is a two-time NIH MERIT Awardee, including one currently active, recipient of the Yale University Graduate Mentor Award in the Biological Sciences for 2026, the Yale Bohmfalk Basic Science Teaching Prize, an elected Fellow of American Association for the Advancement of Science, an elected member of the American Society for Clinical Investigation, a Fellow of the American College of Physicians, and a Master of the American College of Rheumatology.

Last Updated on April 30, 2026.

Appointments

Education & Training

Fellow
Yale School of Medicine (1985)
Resident
Yale-New Haven Hospital (1980)
Intern
Yale-New Haven Hospital (1978)
MD
University of North Carolina (1977)
MD
University of North Carolina , School of Medicine (1977)

Board Certifications

  • Internal Medicine

    Certification Organization
    AB of Internal Medicine
    Original Certification Date
    1980

Research

Overview

The focus of our work is twofold, first, the investigation of systemic autoimmunity begun when I initiated my career. Our early work was devoted to investigation of autoantibodies in systemic lupus erythematosus (SLE, lupus) and related diseases and their autoantigenic targets, studies critical for disease classification and prognosis. We continued our studies understanding how these responses originated, dissecting the T-cell dependence for autoreactive B cell maturation, and the regulation of autoreactive T cells and how the latter promote tissue damage in lupus. As part of these studies, we were the first to identify and characterize the CD4 T helper cell subset that promotes autoantibody formation in lupus, work that naturally led to the second interest of the lab, the fundamentals of T-cell dependent humoral immunity. This work blossomed with our identification and characterization of T follicular helper (Tfh) T cells, in collaboration with Shane Crotty and simultaneouswith two other groups. We have continued our fundamental studies of Tfh cells and the role of CD4 T cell help for licensing of B cellsand other immune cells, including protective and pathogenic CD8 T cells, and the role in CD4 T cell in protective and pathologicalimmunity. These parallel interests of the lab, the pathogenesis of SLE and related diseases, and the fundamentals of CD4 T cell regulation of immunity -- B cells and CD8 T cells in particular -- naturally drive and invigorate one another in the lab, with trainees(graduate students, postdoctoral fellows, and junior faculty) working in both areas.


Medical Research Interests

Antigens, Differentiation, T-Lymphocyte; Autoimmune Diseases; Autoimmunity; Biology; Cytokines; Immunity; Investigative Techniques; Lupus Erythematosus, Systemic; Rheumatology

Research at a Glance

Yale Co-Authors

Frequent collaborators of Joseph Craft's published research.

Publications

2025

2024

2023

Clinical Trials

Current Trials

Academic Achievements & Community Involvement

Activities

  • activity

    Immune Tolerance Network

  • activity

    Lupus Clinical Investigators Network

  • activity

    Alliance for Lupus Research

Honors

  • honor

    2026 Graduate Mentor Award in the Biological Sciences

  • honor

    Distinguished Innovator Award

  • honor

    Master

  • honor

    MERIT Award

  • honor

    Fellow

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