2023
The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era
Wen A, He H, Fu S, Liu S, Miller K, Wang L, Roberts K, Bedrick S, Hersh W, Liu H. The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era. Npj Digital Medicine 2023, 6: 132. PMID: 37479735, PMCID: PMC10362064, DOI: 10.1038/s41746-023-00878-9.Peer-Reviewed Original ResearchAlgorithm development processEase of adoptionDigital health applicationsSoftware applicationsPhenotyping tasksExample implementationInterested usersReusable toolsManual abstractionSuch tasksDevelopment processHealth applicationsDigital eraFoundational requirementCost requirementsTaskImplementationSilico meansFrameworkPotential solutionsRequirementsUsersDatasetAbstractionApplications
2020
Clinical concept extraction: A methodology review
Fu S, Chen D, He H, Liu S, Moon S, Peterson K, Shen F, Wang L, Wang Y, Wen A, Zhao Y, Sohn S, Liu H. Clinical concept extraction: A methodology review. Journal Of Biomedical Informatics 2020, 109: 103526. PMID: 32768446, PMCID: PMC7746475, DOI: 10.1016/j.jbi.2020.103526.Peer-Reviewed Original ResearchConceptsNatural language processingConcept extractionClinical concept extractionACM Digital LibraryExtraction applicationsClinical decision supportDigital librariesExtracting conceptsLanguage processingDecision supportDevelopment processApplicationsMethodology reviewExtractionWebEnglishTextPublicationsProcessingAvailable methodsInformationLibraryQuality improvementSearchTool