2021
Visual comprehension and orientation into the COVID-19 CIDO ontology
Zheng L, Perl Y, He Y, Ochs C, Geller J, Liu H, Keloth V. Visual comprehension and orientation into the COVID-19 CIDO ontology. Journal Of Biomedical Informatics 2021, 120: 103861. PMID: 34224898, PMCID: PMC8252699, DOI: 10.1016/j.jbi.2021.103861.Peer-Reviewed Original ResearchConceptsPartial-area taxonomyCoronavirus Infectious Disease OntologyCompact viewMedium sized ontologiesNames of nodesVisual patternsInfectious Disease OntologySummarization networkOntologyUsersVisual comprehensionDisease OntologyVisualizationNodesTaxonomyLayoutSummarizationGranularityNetworkCIDOConceptViews
2020
Outlier concepts auditing methodology for a large family of biomedical ontologies
Zheng L, Min H, Chen Y, Keloth V, Geller J, Perl Y, Hripcsak G. Outlier concepts auditing methodology for a large family of biomedical ontologies. BMC Medical Informatics And Decision Making 2020, 20: 296. PMID: 33319713, PMCID: PMC7737254, DOI: 10.1186/s12911-020-01311-x.Peer-Reviewed Original ResearchConceptsFamily of ontologiesSummarization networkMeta-ontologyQA techniquesPartial-area taxonomySets of conceptsSpecimen hierarchyScalabilityQA frameworkOntology hierarchyOntologySummarizationNetworkBioPortal ontologiesAudit methodologyQuality assuranceHierarchyNCBOBig pictureCollection of familiesGene hierarchySNOMED