The Pattern of Polymorphism in Arabidopsis thaliana
Nordborg M, Hu T, Ishino Y, Jhaveri J, Toomajian C, Zheng H, Bakker E, Calabrese P, Gladstone J, Goyal R, Jakobsson M, Kim S, Morozov Y, Padhukasahasram B, Plagnol V, Rosenberg N, Shah C, Wall J, Wang J, Zhao K, Kalbfleisch T, Schulz V, Kreitman M, Bergelson J. The Pattern of Polymorphism in Arabidopsis thaliana. PLOS Biology 2005, 3: e196. PMID: 15907155, PMCID: PMC1135296, DOI: 10.1371/journal.pbio.0030196.Peer-Reviewed Original ResearchConceptsPatterns of polymorphismA. thalianaArabidopsis thalianaEvolutionary functional genomicsLinkage disequilibrium decayGenome-wide excessLevel of polymorphismStandard neutral modelDisequilibrium decayFunctional genomicsGene densityNatural populationsSegmental duplicationsGenomic regionsNatural selectionPopulation structureThalianaPolymorphism dataNeutral modelTheoretical null distributionRare allelesShort fragmentsPolymorphismWide surveyGenomics