2011
Integrated Genome-Wide CTCF and CohesinSA1 Occupancy and Expression Analyses in Erythropoiesis
Schulz V, Steiner L, Maksimova Y, Gallagher P. Integrated Genome-Wide CTCF and CohesinSA1 Occupancy and Expression Analyses in Erythropoiesis. Blood 2011, 118: 1305. DOI: 10.1182/blood.v118.21.1305.1305.Peer-Reviewed Original ResearchSites of CTCFCTCF sitesCell-type specificIntergenic regionErythroid cellsChromatin domainsCohesin complexCell typesGene promoterRefSeq genesLong-range chromatin interactionsPrimary human erythroid cellsRepressive chromatin marksCell type-specific mannerDistal intergenic regionsMacromolecule catabolic processHigh-throughput sequencingHuman erythroid cellsMRNA transcriptome analysisChromatin marksChromatin interactionsChromosome segregationInduction of apoptosisCTCF bindingTranscriptional activatorPrimitive Erythroid Progenitors Are Regulated by Hypoxia and Display An Aerobic Glycolytic Metabolic Profile,
Baron M, Isern J, Fraser S, He Z, Ma'ayan A, Schulz V, Tuck D, Gallagher P. Primitive Erythroid Progenitors Are Regulated by Hypoxia and Display An Aerobic Glycolytic Metabolic Profile,. Blood 2011, 118: 3159. DOI: 10.1182/blood.v118.21.3159.3159.Peer-Reviewed Original ResearchErythroid developmentGenome-wide expression profilingErythroid cell fateCandidate transcriptional regulatorsCell typesHIF-1Transcription factor HIF-1Early mouse embryosMouse yolk sacNumber of genesHIF-1 target genesMost mammalian cellsAnalysis of promotersYolk sacDominant negative regulatorGlycolytic metabolic profileStem/progenitorsPrimitive erythropoiesisPrimitive erythroid progenitorsMesodermal progenitorsCell fateTranscriptional regulatorsTranscription profilingMammalian embryosKinase network
2009
Genome Expression Profiling of the First Hematopoietic Progenitors of the Mouse Embryo.
Baron M, Isern J, Fraser S, He Z, Tuck D, Schulz V, Gallagher P. Genome Expression Profiling of the First Hematopoietic Progenitors of the Mouse Embryo. Blood 2009, 114: 2536. DOI: 10.1182/blood.v114.22.2536.2536.Peer-Reviewed Original ResearchGenome expression profilingMouse embryosGFP reporterExpression profilingErythroid lineageLineage-specific cell typesEmbryonic globin genesDefinitive erythroid lineagesHematopoietic progenitorsGlobin gene expressionCandidate transcriptional regulatorsCell typesPrimitive erythroid lineageLineage-specific expressionEarly mouse embryosAnalysis of promotersEnd of gastrulationEmbryonic day 7.5Hematopoietic cell typesEarly hematopoietic progenitorsExpression of GATA2Distinct functional classesOrganelle biogenesisRibosome biogenesisPrimitive erythropoiesis