2022
Deconvolution of in vivo protein-RNA contacts using fractionated eCLIP-seq
Biancon G, Busarello E, Joshi P, Lesch B, Halene S, Tebaldi T. Deconvolution of in vivo protein-RNA contacts using fractionated eCLIP-seq. STAR Protocols 2022, 3: 101823. PMID: 36595959, PMCID: PMC9676202, DOI: 10.1016/j.xpro.2022.101823.Peer-Reviewed Original ResearchConceptsProtein-RNA interactionsIndividual RNA-binding proteinsTranscriptome-wide analysisThousands of RNAsProtein-RNA contactsRNA-binding proteinSingle nucleotide levelComputational analysis pipelineRNA processingMulticomponent complexesRNA immunoprecipitationRead countsComplete detailsAnalysis pipelineAdditional levelProteinImmunoprecipitationRNAInteractionComplexes
2020
Publisher Correction: Regulation of cellular sterol homeostasis by the oxygen responsive noncoding RNA lincNORS
Wu X, Niculite C, Preda M, Rossi A, Tebaldi T, Butoi E, White M, Tudoran O, Petrusca D, Jannasch A, Bone W, Zong X, Fang F, Burlacu A, Paulsen M, Hancock B, Sandusky G, Mitra S, Fishel M, Buechlein A, Ivan C, Oikonomopoulos S, Gorospe M, Mosley A, Radovich M, Davé U, Ragoussis J, Nephew K, Mari B, McIntyre A, Konig H, Ljungman M, Cousminer D, Macchi P, Ivan M. Publisher Correction: Regulation of cellular sterol homeostasis by the oxygen responsive noncoding RNA lincNORS. Nature Communications 2020, 11: 5737. PMID: 33159065, PMCID: PMC7648073, DOI: 10.1038/s41467-020-19708-7.Peer-Reviewed Original Research