2021
A machine learning approach to integrating genetic and ecological data in tsetse flies (Glossina pallidipes) for spatially explicit vector control planning
Bishop AP, Amatulli G, Hyseni C, Pless E, Bateta R, Okeyo WA, Mireji PO, Okoth S, Malele I, Murilla G, Aksoy S, Caccone A, Saarman NP. A machine learning approach to integrating genetic and ecological data in tsetse flies (Glossina pallidipes) for spatially explicit vector control planning. Evolutionary Applications 2021, 14: 1762-1777. PMID: 34295362, PMCID: PMC8288027, DOI: 10.1111/eva.13237.Peer-Reviewed Original ResearchGenetic dataVectors of humanLake Victoria basinAnimal African trypanosomiasisGenetic connectivityVector-borne disease transmissionFuture monitoring effortsMicrosatellite lociHabitat useImportant environmental predictorsHabitat suitabilityFuture climatic changesDispersal patternsVictoria basinEcological dataEnvironmental predictorsVector systemTsetse fliesTsetse speciesClimatic shiftsFliesClimatic changesSampling sitesMonitoring effortsVector control
2019
Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
Attardo GM, Abd-Alla AMM, Acosta-Serrano A, Allen JE, Bateta R, Benoit JB, Bourtzis K, Caers J, Caljon G, Christensen MB, Farrow DW, Friedrich M, Hua-Van A, Jennings EC, Larkin DM, Lawson D, Lehane MJ, Lenis VP, Lowy-Gallego E, Macharia RW, Malacrida AR, Marco HG, Masiga D, Maslen GL, Matetovici I, Meisel RP, Meki I, Michalkova V, Miller WJ, Minx P, Mireji PO, Ometto L, Parker AG, Rio R, Rose C, Rosendale AJ, Rota-Stabelli O, Savini G, Schoofs L, Scolari F, Swain MT, Takáč P, Tomlinson C, Tsiamis G, Van Den Abbeele J, Vigneron A, Wang J, Warren WC, Waterhouse RM, Weirauch MT, Weiss BL, Wilson RK, Zhao X, Aksoy S. Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes. Genome Biology 2019, 20: 187. PMID: 31477173, PMCID: PMC6721284, DOI: 10.1186/s13059-019-1768-2.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsDNA Transposable ElementsDrosophila melanogasterFemaleGene Expression RegulationGenes, InsectGenes, X-LinkedGenome, InsectGenomicsGeographyInsect ProteinsInsect VectorsMaleMutagenesis, InsertionalPhylogenyRepetitive Sequences, Nucleic AcidSequence Homology, Amino AcidSyntenyTrypanosomaTsetse FliesWolbachiaConceptsFemale-specific gene expressionMale seminal proteinsSex-linked scaffoldsComparative genomic analysisLow evolutionary ratesVectors of humanSyntenic analysisEvolutionary ratesNovel pestsEvolutionary relationshipsBacterial symbiosisGustatory genesEvolutionary biologyHelicase activityStructural conservationDifferent habitatsSeminal proteinsGenomic analysisHost preferenceX chromosomeDisease control strategiesUnique adaptationsGene expressionAfrican trypanosomesRhodopsin gene