2012
Crohn's Disease Risk Alleles on the NOD2 Locus Have Been Maintained by Natural Selection on Standing Variation
Nakagome S, Mano S, Kozlowski L, Bujnicki JM, Shibata H, Fukumaki Y, Kidd JR, Kidd KK, Kawamura S, Oota H. Crohn's Disease Risk Alleles on the NOD2 Locus Have Been Maintained by Natural Selection on Standing Variation. Molecular Biology And Evolution 2012, 29: 1569-1585. PMID: 22319155, PMCID: PMC3697811, DOI: 10.1093/molbev/mss006.Peer-Reviewed Original ResearchMeSH KeywordsAmino Acid SubstitutionCrohn DiseaseGene FrequencyGenetic Predisposition to DiseaseGenotyping TechniquesHaplotypesHumansModels, GeneticModels, MolecularNod2 Signaling Adaptor ProteinPhylogenyPolymorphism, Single NucleotideProtein Structure, SecondaryProtein Structure, TertiaryRisk FactorsSelection, GeneticSequence Analysis, DNAConceptsDisease risk allelesNatural selectionCD risk allelesGenome-wide association studiesClassical linkage analysisMost recent common ancestorPhylogenetic network analysisRecent common ancestorNOD2 proteinProtein structural predictionRecent genome-wide association studiesHigh-frequency haplotypesSerious conformational changesEuropean populationsAmino acid substitutionsRisk allelesStanding variationDeleterious haplotypesEvolutionary studiesCoalescent simulationsCommon ancestorGenomic regionsNon-European populationsEntire genomeDiploid individuals
2007
Human genetic variation of medical significance
Kidd K, Kidd J. Human genetic variation of medical significance. 2007, 51-62. DOI: 10.1093/acprof:oso/9780199207466.003.0005.Peer-Reviewed Original ResearchGenetic variationNormal genetic variationRandom genetic driftSignificant genetic variationLoss of variationHuman genetic variationAllele frequency variationHuman evolutionary historyEvolutionary historyGenetic driftNatural selectionModern humansMedical significanceGeographic regionsLociHumansVariationSelectionDemographyMetabolismTaste perceptionComplex waysIsolationMigration4-OR: Global diversity of KIR and HLA: Population-level evidence for co-evolution, natural selection, and signatures of demographic history
Single R, Martin M, Gao X, Meyer D, Yeager M, Kidd J, Kidd K, Carrington M. 4-OR: Global diversity of KIR and HLA: Population-level evidence for co-evolution, natural selection, and signatures of demographic history. Human Immunology 2007, 68: s10. DOI: 10.1016/j.humimm.2007.08.009.Peer-Reviewed Original Research
1996
Dynamics of the haplotype frequencies in populations: study using the Monte Carlo method.
Grigorenko E, Shikanian A, Kidd D, Dorig R, Kidd K. Dynamics of the haplotype frequencies in populations: study using the Monte Carlo method. Genetika 1996, 32: 1705-13. PMID: 9102365.Peer-Reviewed Original ResearchConceptsNatural selectionEffective population sizeRandom genetic driftMonte Carlo methodHaplotype frequenciesGenetic driftRandom matingEvolutionary dynamicsCarlo methodPopulation sizeRecurrent mutationsMutation processHarmonic meanFrequency dynamicsDifferent populationsSimulation resultsExperimental dataDynamicsMatingPopulationMutationsHaplotypesAllelesColonizationNew World colonization
1991
Drift, admixture, and selection in human evolution: a study with DNA polymorphisms.
Bowcock A, Kidd J, Mountain J, Hebert J, Carotenuto L, Kidd K, Cavalli-Sforza L. Drift, admixture, and selection in human evolution: a study with DNA polymorphisms. Proceedings Of The National Academy Of Sciences Of The United States Of America 1991, 88: 839-843. PMID: 1992475, PMCID: PMC50909, DOI: 10.1073/pnas.88.3.839.Peer-Reviewed Original ResearchConceptsDNA polymorphismsEqual evolutionary ratesRandom genetic driftEvolutionary ratesGenetic driftEvolutionary analysisNatural selectionGenetic markersHuman evolutionGene frequenciesEarly admixtureHuman differentiationEvolutionary modelsPolymorphismHigh variationLow variationGenetic polymorphismsMeasures of variationGenesPopulationSpeciesObserved distributionDifferentiationVariationSelection