Featured Publications
The Complete Genome Sequences, Unique Mutational Spectra, and Developmental Potency of Adult Neurons Revealed by Cloning
Hazen JL, Faust GG, Rodriguez AR, Ferguson WC, Shumilina S, Clark RA, Boland MJ, Martin G, Chubukov P, Tsunemoto RK, Torkamani A, Kupriyanov S, Hall IM, Baldwin KK. The Complete Genome Sequences, Unique Mutational Spectra, and Developmental Potency of Adult Neurons Revealed by Cloning. Neuron 2016, 89: 1223-1236. PMID: 26948891, PMCID: PMC4795965, DOI: 10.1016/j.neuron.2016.02.004.Peer-Reviewed Original ResearchMeSH KeywordsAge FactorsAnimalsAnimals, NewbornCadherin Related ProteinsCadherinsCell DivisionCloning, MolecularDNA Transposable ElementsEmbryo, MammalianFemaleHumansKi-67 AntigenMiceMice, TransgenicMicrosatellite RepeatsMutationNerve Tissue ProteinsNeuronsNuclear Transfer TechniquesOlfactory BulbOocytesSequence Analysis, DNAConceptsCell type diversificationComplete genome sequenceMobile element insertionsNuclear transfer methodWhole-genome sequencingNeuronal genomeGene-disrupting mutationsNeuronal mutationsGenome sequenceUnique mutational spectrumDevelopmental potencyComprehensive mutation detectionElement insertionsGenomic mutationsRecurrent rearrangementsNovel mechanismUnique mutationsMutationsSomatic mutationsGene biasGenomeAdult neuronsMutational spectrumFertile miceMutation detection
2017
Using Cloning to Amplify Neuronal Genomes for Whole-Genome Sequencing and Comprehensive Mutation Detection and Validation
Hazen J, Duran M, Smith R, Rodriguez A, Martin G, Kupriyanov S, Hall I, Baldwin K. Using Cloning to Amplify Neuronal Genomes for Whole-Genome Sequencing and Comprehensive Mutation Detection and Validation. Neuromethods 2017, 131: 163-185. DOI: 10.1007/978-1-4939-7280-7_9.Peer-Reviewed Original ResearchNeuronal genomeSomatic cell nuclear transferEmbryonic cell lineClasses of mutationsEmbryonic stem cellsSequencing-based approachesCell nuclear transferSomatic mutationsWhole-genome sequencingNext-generation sequencingMutation detectionSomatic cellsBioinformatics methodsComprehensive mutation detectionNuclear transferIndividual mutationsGenomeCell typesStem cellsNew mutationsMutationsSingle cellsSequencingCell linesFalse positive calls