Featured Publications
Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator.
He H, Fu S, Wang L, Wen A, Liu S, Moon S, Miller K, Liu H. Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator. AMIA Annual Symposium Proceedings 2023, 2022: 532-541. PMID: 37128369, PMCID: PMC10148300.Peer-Reviewed Original ResearchConceptsAnnotation toolWeb-based annotation toolNatural language processing systemsCorpus developmentUser-centered interfacesData security concernsLanguage processing systemTarget end usersAnnotation taskClinical NLPAnnotation processEnd usersSecurity concernsLightweight solutionPowerful featuresAdvanced featuresProcessing systemCore taskTool developmentTaskCorpusAnnotatorsToolNLPUsers
2023
Acquisition of a Lexicon for Family History Information: Bidirectional Encoder Representations From Transformers–Assisted Sublanguage Analysis
Wang L, He H, Wen A, Moon S, Fu S, Peterson K, Ai X, Liu S, Kavuluru R, Liu H. Acquisition of a Lexicon for Family History Information: Bidirectional Encoder Representations From Transformers–Assisted Sublanguage Analysis. JMIR Medical Informatics 2023, 11: e48072. PMID: 37368483, PMCID: PMC10337517, DOI: 10.2196/48072.Peer-Reviewed Original ResearchChallenge data setInformation extractionClinical decision support applicationsNatural language processing systemsUnified Medical Language SystemLexical resourcesDecision support applicationsBidirectional Encoder RepresentationsLanguage processing systemConcept unique identifiersData setsTransformer-based methodData analyticsElectronic health recordsF1 scoreClinical notesMedicine Clinical TermsEncoder RepresentationsSupport applicationsUnique identifiersProcessing systemSublanguage analysisHistory informationReasonable performanceSystematized Nomenclature