2024
Mapping Clinical Documents to the Logical Observation Identifiers, Names and Codes (LOINC) Document Ontology using Electronic Health Record Systems Structured Metadata.
Khan H, Mosa A, Paka V, Rana M, Mandhadi V, Islam S, Xu H, McClay J, Sarker S, Rao P, Waitman L. Mapping Clinical Documents to the Logical Observation Identifiers, Names and Codes (LOINC) Document Ontology using Electronic Health Record Systems Structured Metadata. AMIA Annual Symposium Proceedings 2024, 2023: 1017-1026. PMID: 38222329, PMCID: PMC10785913.Peer-Reviewed Original ResearchConceptsDocument ontologyElectronic health recordsBag-of-words approachNatural language processing techniquesFree-text documentsLanguage processing techniquesClinical documentationLogical Observation IdentifiersText documentsStructured metadataWords approachComputational scalabilityMetadataHealth recordsEHR documentationElectronic health record fieldsProcessing techniquesOntologyDocumentsAutomated pipelineNLPScalabilityClinical careFrameworkLOINC
2020
Coronavirus: indexed data speed up solutions
Ohno-Machado L, Xu H. Coronavirus: indexed data speed up solutions. Nature 2020, 584: 192-192. PMID: 32782375, DOI: 10.1038/d41586-020-02331-3.Commentaries, Editorials and Letters
2017
Finding useful data across multiple biomedical data repositories using DataMed
Ohno-Machado L, Sansone S, Alter G, Fore I, Grethe J, Xu H, Gonzalez-Beltran A, Rocca-Serra P, Gururaj A, Bell E, Soysal E, Zong N, Kim H. Finding useful data across multiple biomedical data repositories using DataMed. Nature Genetics 2017, 49: 816-819. PMID: 28546571, PMCID: PMC6460922, DOI: 10.1038/ng.3864.Peer-Reviewed Original ResearchConceptsBiomedical data repositoriesHealth big dataData setsKnowledge discoveryBig dataMultiple repositoriesSearch enginesData indexFAIR principlesDataMedData repositoryService providersKnowledge initiativesKnowledge expertsBiomedical research communityResearch communityRepositoryScience landscapeUseful dataInteroperabilityMetadataFindabilitySetEngineData