2024
Standardizing Multi-site Clinical Note Titles to LOINC Document Ontology: A Transformer-based Approach.
Zuo X, Zhou Y, Duke J, Hripcsak G, Shah N, Banda J, Reeves R, Miller T, Waitman L, Natarajan K, Xu H. Standardizing Multi-site Clinical Note Titles to LOINC Document Ontology: A Transformer-based Approach. AMIA Annual Symposium Proceedings 2024, 2023: 834-843. PMID: 38222429, PMCID: PMC10785935.Peer-Reviewed Original Research
2023
Towards precise PICO extraction from abstracts of randomized controlled trials using a section-specific learning approach
Hu Y, Keloth V, Raja K, Chen Y, Xu H. Towards precise PICO extraction from abstracts of randomized controlled trials using a section-specific learning approach. Bioinformatics 2023, 39: btad542. PMID: 37669123, PMCID: PMC10500081, DOI: 10.1093/bioinformatics/btad542.Peer-Reviewed Original ResearchNatural language processingMicro-F1 scoreCOVID-19 datasetNLP pipelineF1 scoreEntity recognition modelAD datasetPICO elementsSentence classificationNER modelRecognition modelLanguage processingLearning approachLearning modelEnd evaluationSupplementary dataDatasetPipelineExtractionInformationRCT abstractsAnnotationSentencesBioinformaticsComplexity