2022
mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis
Movassagh M, Morton S, Hehnly C, Smith J, Doan T, Irizarry R, Broach J, Schiff S, Bailey J, Paulson J. mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis. BMC Genomics 2022, 23: 439. PMID: 35698050, PMCID: PMC9191533, DOI: 10.1186/s12864-022-08558-w.Peer-Reviewed Original ResearchConceptsSARS-CoV-2 infectionLung epithelial cellsEpithelial cellsHuman lung epithelial cellsSARS-CoV-2NK cellsStatistical PackageEBV miRNAsT cellsImmune pathwaysB cellsClinical relevanceSample cohortCD34 cellsStomach adenocarcinomaEndothelial cellsTime pointsInfectionCOVID-19CellsCD4AdenocarcinomaPatientsCD19Cytokines
2017
Human and Epstein-Barr Virus miRNA Profiling as Predictive Biomarkers for Endemic Burkitt Lymphoma
Oduor C, Movassagh M, Kaymaz Y, Chelimo K, Otieno J, Ong'echa J, Moormann A, Bailey J. Human and Epstein-Barr Virus miRNA Profiling as Predictive Biomarkers for Endemic Burkitt Lymphoma. Frontiers In Microbiology 2017, 8: 501. PMID: 28400759, PMCID: PMC5368269, DOI: 10.3389/fmicb.2017.00501.Peer-Reviewed Original ResearchEndemic Burkitt lymphomaEpstein-Barr virusEBV miRNAsPredictive biomarkersPatient outcomesBurkitt's lymphomaAggressive B-cell lymphomasInitial patient outcomesB-cell lymphomaPatient tumor samplesTumor resilienceTumor cell survivalClinical presentationJaw tumorsPoor outcomeDisease progressionAnatomical presentationCell lymphomaSignificant associationEvasion of apoptosisMYC proto-oncogeneTumor samplesMiR-10aTarget genesLymphoma