2024
Temporal control of the Aux/IAA genes BnIAA32 and BnIAA34 mediates Brassica napus dual shade responses
Li Y, Guo Y, Cao Y, Xia P, Xu D, Sun N, Jiang L, Dong J. Temporal control of the Aux/IAA genes BnIAA32 and BnIAA34 mediates Brassica napus dual shade responses. Journal Of Integrative Plant Biology 2024, 66: 928-942. PMID: 37929685, DOI: 10.1111/jipb.13582.Peer-Reviewed Original ResearchConceptsB. napus seedlingsShade responseAuxin biosynthesisHypocotyl elongationGenome-wide selective sweep analysisAuxin/indole-3-acetic acidSelective sweep analysisShade-avoiding plantsIncreased auxin biosynthesisShade avoidance responseSensitivity to auxinInhibit hypocotyl elongationAuxin signalingArabidopsis thalianaShort hypocotylsPhytochrome AShade toleranceGenetic studiesB. napusPlant growthMolecular mechanismsBrassica napusLight qualitySeedlingsArabidopsis
2021
grasviq: an image analysis framework for automatically quantifying vein number and morphology in grass leaves
Robil J, Gao K, Neighbors C, Boeding M, Carland F, Bunyak F, McSteen P. grasviq: an image analysis framework for automatically quantifying vein number and morphology in grass leaves. The Plant Journal 2021, 107: 629-648. PMID: 33914380, DOI: 10.1111/tpj.15299.Peer-Reviewed Original ResearchConceptsVein traitsClassical computer vision techniquesGrass speciesComputer vision techniquesParallel venationImage data setsImage analysis frameworkProductivity of plantsVision techniquesAuxin biosynthesisMutant screensComputational image analysisInterveinal distanceGenetic experimentsVein densityOryza sativaTransport mutantsImage analysis programVein patternsLeaf piecesVein numberZea maysReticulate venationManual quantificationGrass leaves
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