2016
Compact Integration of Multi-Network Topology for Functional Analysis of Genes
Cho H, Berger B, Peng J. Compact Integration of Multi-Network Topology for Functional Analysis of Genes. Cell Systems 2016, 3: 540-548.e5. PMID: 27889536, PMCID: PMC5225290, DOI: 10.1016/j.cels.2016.10.017.Peer-Reviewed Original ResearchMultiple heterogeneous networksBiological network dataLow-dimensional vectorsProtein function predictionMashup frameworkShelf machineArt performanceHeterogeneous networksNetwork dataScience domainMashupsIndividual networksInference tasksTopological landscapeNetwork integrationInteraction predictionNetworkFunction predictionUnsolved challengeMore accurate inferencesPresent toolsAccurate inferenceFunctional interaction networkTopological contextTopological patterns
2013
Privacy Technology to Support Data Sharing for Comparative Effectiveness Research
Jiang X, Sarwate A, Ohno-Machado L. Privacy Technology to Support Data Sharing for Comparative Effectiveness Research. Medical Care 2013, 51: s58-s65. PMID: 23774511, PMCID: PMC3728160, DOI: 10.1097/mlr.0b013e31829b1d10.Peer-Reviewed Reviews, Practice Guidelines, Standards, and Consensus StatementsConceptsData sharingPrivacy-preserving data sharingPrivacy-preserving technologiesEffective data sharingPrivacy technologiesData miningNetwork dataData typesThird-party expertsData tablesSpecific scenariosSharingInappropriate disclosurePractical evaluationPractical impactPatient dataNew technologiesTechnologyPrivacyComparative effectiveness researchMiningPractical toolCER studiesTextTime series
2011
Assessing the Quality of Diffusion Models using Real-World Social Network Data
Kuo T, Hung S, Lin W, Lin S, Peng T, Shih C. Assessing the Quality of Diffusion Models using Real-World Social Network Data. 2011, 200-205. DOI: 10.1109/taai.2011.42.Peer-Reviewed Original ResearchIndependent Cascade ModelMicro-blog dataLinear threshold modelMicro-blogInformation propagationReal worldSocial networksIndirect schemePlurkCascade modelEvaluation frameworkIn-degreeNetwork dataSchemeCascading phenomenaFrameworkDifferent circumstancesPageRankTwitterNetworkDataFacebookDiffusion eventsModelDiffusion model
2009
Kalman Meets Neuron: The Emerging Intersection of Control Theory with Neuroscience
Schiff S. Kalman Meets Neuron: The Emerging Intersection of Control Theory with Neuroscience. Annual International Conference Of The IEEE Engineering In Medicine And Biology Society (EMBC) 2009, 2009: 3318-3321. PMID: 19964302, PMCID: PMC3644303, DOI: 10.1109/iembs.2009.5333752.Peer-Reviewed Original ResearchConceptsControl theoryNonlinear control theoryModern control theoryKalman filtering techniqueSingle neuron dynamicsComplex network dataWave dynamicsModel networksControl frameworkComputational neuroscienceNeuron dynamicsFiltering techniqueAccurate reconstructionMature theoryTheoryDynamicsNetwork dataKalmanConsensus setNeuroscience modelsField
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