2024
Learnable Filters for Geometric Scattering Modules
Tong A, Wenkel F, Bhaskar D, Macdonald K, Grady J, Perlmutter M, Krishnaswamy S, Wolf G. Learnable Filters for Geometric Scattering Modules. IEEE Transactions On Signal Processing 2024, 72: 2939-2952. PMID: 40843462, PMCID: PMC12366857, DOI: 10.1109/tsp.2024.3378001.Peer-Reviewed Original ResearchGraph neural networksGraph classification benchmarksEncode graph structureData exploration tasksGeometric scattering transformGraph wavelet filtersClassification benchmarksLearned representationsLearnable filtersLearning parametersGraph structureNeural networkExploration tasksWavelet filtersBand-pass featureBiochemical domainNetworkAdaptive tuningWaveletGraphPredictive performanceScattering modulationScattering transformMathematical propertiesFilter
2023
Riemannian frameworks for the harmonization of resting-state functional MRI scans
Honnorat N, Seshadri S, Killiany R, Blangero J, Glahn D, Fox P, Habes M. Riemannian frameworks for the harmonization of resting-state functional MRI scans. Medical Image Analysis 2023, 91: 103043. PMID: 38029722, PMCID: PMC11157681, DOI: 10.1016/j.media.2023.103043.Peer-Reviewed Original ResearchRiemannian geometric frameworkHigh-dimensional data setsMathematical propertiesFunctional time seriesTime seriesGeometric frameworkLow-dimensional data setsStatistical methodsCovariate effectsData setsGreater statistical powerSynthetic dataStatistical powerImpact of covariatesLarge setSetABIDE consortiumNew framework
2021
A fast likelihood approach for estimation of large phylogenies from continuous trait data
Peng J, Rajeevan H, Kubatko L, RoyChoudhury A. A fast likelihood approach for estimation of large phylogenies from continuous trait data. Molecular Phylogenetics And Evolution 2021, 161: 107142. PMID: 33713799, DOI: 10.1016/j.ympev.2021.107142.Peer-Reviewed Original ResearchConceptsContinuous trait dataMaximum likelihood estimatorMaximum likelihood estimatesMathematical propertiesHundreds of taxaInternal branch lengthsFast approximationAddition of taxaLarge-scale genomic dataCollection of methodsBayesian frameworkLikelihood estimatorLikelihood estimatesLikelihood approachMaximum likelihoodIntensive calculationsModel-based methodApproximationLarge phylogeniesComparable accuracyPossible phylogenyInferenceBranch lengthsEstimatorSuch data
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