Publications

Banerjee AR, Kim YJ and Kim TH: A novel virus-inducible enhancer of the interferon-β gene with tightly linked promoter and enhancer activities. Nucleic Acids Res. 2014 Nov 10;42 (20) :12537-54. Epub 2014 Oct 27. PMID: 25348400


Kim LK, Esplugues E, Zorca CE, Parisi F, Kluger Y, Kim TH, Galjart NJ and Flavell RA: Oct-1 regulates IL-17 expression by directing interchromosomal associations in conjunction with CTCF in T cells. Mol Cell. 2014 Apr 10;54 (1) :56-66. Epub 2014 Mar 6. PMID: 24613343


Kim JM, Kim TH, Lee HH, Lee SH and Wang T: Postmenopausal hypertension and sodium sensitivity. J Menopausal Med. 2014 Apr;20 (1) :1-6. Epub 2014 Apr 28. PMID: 25371885

Kim YJ, Greer CB, Cecchini KR, Harris LN, Tuck DP and Kim TH: HDAC inhibitors induce transcriptional repression of high copy number genes in breast cancer through elongation blockade. Oncogene. 2013 Jun 6;32 (23) :2828-35. Epub 2013 Feb 25. PMID: 23435418

Baysal BE, McKay SE, Kim YJ, Zhang Z, Alila L, Willett-Brozick JE, Pacak K, Kim TH and Shadel GS: Genomic imprinting at a boundary element flanking the SDHD locus. Hum Mol Genet. 2011 Nov 15;20 (22) :4452-61. Epub 2011 Aug 23. PMID: 21862453


Kim YJ, Cecchini KR and Kim TH: Conserved, developmentally regulated mechanism couples chromosomal looping and heterochromatin barrier activity at the homeobox gene A locus. Proc Natl Acad Sci U S A. 2011 May 3;108 (18) :7391-6. Epub 2011 Apr 18. PMID: 21502535

Cecchini KR, Raja Banerjee A and Kim TH: Towards a genome-wide reconstruction of cis-regulatory networks in the human genome. Semin Cell Dev Biol. 2009 Sep;20 (7) :842-8. Epub 2009 Jun 26. PMID: 19560550


Wacker DA and Kim TH: From sextant to GPS: twenty-five years of mapping the genome with ChIP. J Cell Biochem. 2009 May 1;107 (1) :6-10. PMID: 19180576

Kim TH, Barrera LO and Ren B: ChIP-chip for genome-wide analysis of protein binding in mammalian cells. Curr Protoc Mol Biol. 2007 Jul;Chapter 21 :Unit 21.13. PMID: 18265397


Kim TH, Abdullaev ZK, Smith AD, Ching KA, Loukinov DI, Green RD, Zhang MQ, Lobanenkov VV and Ren B: Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome. Cell. 2007 Mar 23;128 (6) :1231-45. PMID: 17382889

Pre-2007

Sun P, Xiong H, Kim TH, Ren B and Zhang Z: Positive inter-regulation between beta-catenin/T cell factor-4 signaling and endothelin-1 signaling potentiates proliferation and survival of prostate cancer cells. Mol Pharmacol. 2006 Feb;69 (2) :520-31. Epub 2005 Nov 16. PMID: 16291872


Kim TH and Ren B: Genome-wide analysis of protein-DNA interactions. Annu Rev Genomics Hum Genet. 2006;7 :81-102. PMID: 16722805


Kim TH and Ren B: An all-round view of eukaryotic transcription. Genome Biol. 2006;7 (7) :323. PMID: 16879733

Kim TH, Barrera LO, Zheng M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD and Ren B: A high-resolution map of active promoters in the human genome. Nature. 2005 Aug 11;436 (7052) :876-80. Epub 2005 Jun 29. PMID: 15988478


Kim TH, Barrera LO, Qu C, Van Calcar S, Trinklein ND, Cooper SJ, Luna RM, Glass CK, Rosenfeld MG, Myers RM and Ren B: Direct isolation and identification of promoters in the human genome. Genome Res. 2005 Jun;15 (6) :830-9. Epub 2005 May 17. PMID: 15899964


Kim TH, Xiong H, Zhang Z and Ren B: beta-Catenin activates the growth factor endothelin-1 in colon cancer cells. Oncogene. 2005 Jan 20;24 (4) :597-604. PMID: 15558022

: The ENCODE (ENCyclopedia Of DNA Elements) Project. Science. 2004 Oct 22;306 (5696) :636-40. PMID: 15499007

Ren B, Chee KJ, Kim TH and Maniatis T: PRDI-BF1/Blimp-1 repression is mediated by corepressors of the Groucho family of proteins. Genes Dev. 1999 Jan 1;13 (1) :125-37. PMID: 9887105

Kim TK, Kim TH and Maniatis T: Efficient recruitment of TFIIB and CBP-RNA polymerase II holoenzyme by an interferon-beta enhanceosome in vitro. Proc Natl Acad Sci U S A. 1998 Oct 13;95 (21) :12191-6. PMID: 9770462


Maniatis T, Falvo JV, Kim TH, Kim TK, Lin CH, Parekh BS and Wathelet MG: Structure and function of the interferon-beta enhanceosome. Cold Spring Harb Symp Quant Biol. 1998;63 :609-20. PMID: 10384326