Banerjee AR, Kim YJ, Kim TH: A novel virus-inducible enhancer of the interferon-β gene with tightly linked promoter and enhancer activities. Nucleic Acids Res. 2014 Nov 10; 2014 Oct 27. PMID: 25348400

Kim LK, Esplugues E, Zorca CE, Parisi F, Kluger Y, Kim TH, Galjart NJ, Flavell RA: Oct-1 regulates IL-17 expression by directing interchromosomal associations in conjunction with CTCF in T cells. Mol Cell. 2014 Apr 10; 2014 Mar 6. PMID: 24613343

Kim JM, Kim TH, Lee HH, Lee SH, Wang T: Postmenopausal hypertension and sodium sensitivity. J Menopausal Med. 2014 Apr; 2014 Apr 28. PMID: 25371885

Kim YJ, Greer CB, Cecchini KR, Harris LN, Tuck DP, Kim TH: HDAC inhibitors induce transcriptional repression of high copy number genes in breast cancer through elongation blockade. Oncogene. 2013 Jun 6; 2013 Feb 25. PMID: 23435418

Baysal BE, McKay SE, Kim YJ, Zhang Z, Alila L, Willett-Brozick JE, Pacak K, Kim TH, Shadel GS: Genomic imprinting at a boundary element flanking the SDHD locus. Hum Mol Genet. 2011 Nov 15; 2011 Aug 23. PMID: 21862453

Kim YJ, Cecchini KR, Kim TH: Conserved, developmentally regulated mechanism couples chromosomal looping and heterochromatin barrier activity at the homeobox gene A locus. Proc Natl Acad Sci U S A. 2011 May 3; 2011 Apr 18. PMID: 21502535

Cecchini KR, Raja Banerjee A, Kim TH: Towards a genome-wide reconstruction of cis-regulatory networks in the human genome. Semin Cell Dev Biol. 2009 Sep; 2009 Jun 26. PMID: 19560550

Wacker DA, Kim TH: From sextant to GPS: twenty-five years of mapping the genome with ChIP. J Cell Biochem. 2009 May 1. PMID: 19180576

Kim TH, Barrera LO, Ren B: ChIP-chip for genome-wide analysis of protein binding in mammalian cells. Curr Protoc Mol Biol. 2007 Jul. PMID: 18265397

Kim TH, Abdullaev ZK, Smith AD, Ching KA, Loukinov DI, Green RD, Zhang MQ, Lobanenkov VV, Ren B: Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome. Cell. 2007 Mar 23. PMID: 17382889


Sun P, Xiong H, Kim TH, Ren B, Zhang Z: Positive inter-regulation between beta-catenin/T cell factor-4 signaling and endothelin-1 signaling potentiates proliferation and survival of prostate cancer cells. Mol Pharmacol. 2006 Feb; 2005 Nov 16. PMID: 16291872

Kim TH, Ren B: Genome-wide analysis of protein-DNA interactions. Annu Rev Genomics Hum Genet. 2006. PMID: 16722805

Kim TH, Ren B: An all-round view of eukaryotic transcription. Genome Biol. 2006. PMID: 16879733

Kim TH, Barrera LO, Zheng M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B: A high-resolution map of active promoters in the human genome. Nature. 2005 Aug 11; 2005 Jun 29. PMID: 15988478

Kim TH, Barrera LO, Qu C, Van Calcar S, Trinklein ND, Cooper SJ, Luna RM, Glass CK, Rosenfeld MG, Myers RM, Ren B: Direct isolation and identification of promoters in the human genome. Genome Res. 2005 Jun; 2005 May 17. PMID: 15899964

Kim TH, Xiong H, Zhang Z, Ren B: beta-Catenin activates the growth factor endothelin-1 in colon cancer cells. Oncogene. 2005 Jan 20. PMID: 15558022

ENCODE Project Consortium: The ENCODE (ENCyclopedia Of DNA Elements) Project. Science. 2004 Oct 22. PMID: 15499007

Ren B, Chee KJ, Kim TH, Maniatis T: PRDI-BF1/Blimp-1 repression is mediated by corepressors of the Groucho family of proteins. Genes Dev. 1999 Jan 1. PMID: 9887105

Kim TK, Kim TH, Maniatis T: Efficient recruitment of TFIIB and CBP-RNA polymerase II holoenzyme by an interferon-beta enhanceosome in vitro. Proc Natl Acad Sci U S A. 1998 Oct 13. PMID: 9770462

Maniatis T, Falvo JV, Kim TH, Kim TK, Lin CH, Parekh BS, Wathelet MG: Structure and function of the interferon-beta enhanceosome. Cold Spring Harb Symp Quant Biol. 1998. PMID: 10384326

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Other Publications

  • Tae Hoon Kim and Job Dekker. Crosslinking Technologies for Analysis of Chromatin Structure and Function. in Molecular Cloning: A Laboratory Manual (ed. M. R. Green and J. Sambrook). Cold Spring Harbor Laboratory Press, Cold Spring Harbor (2012) amazon.

  • David A. Wacker, Yoon Jung Kim and Tae Hoon Kim. Chromatin modifications distinguish genomic features and physical organization of the nucleus. in Handbook of Epigenetics: The New Molecular and Medical Genetics (ed. T. Tollefsbol). Elsevier Academic Press (2010) amazon.