Publications

1.

Dynamic encoding of perception, memory, and movement in a C. elegans chemotaxis circuit.

Luo L, Wen Q, Ren J, Hendricks M, Gershow M, Qin Y, Greenwood J, Soucy ER, Klein M, Smith-Parker HK, Calvo AC, Colón-Ramos DA, Samuel AD, Zhang Y.

Neuron. 2014 Jun 4;82 (5) :1115-28. PMID: 24908490

2.

Bidirectional thermotaxis in Caenorhabditis elegans is mediated by distinct sensorimotor strategies driven by the AFD thermosensory neurons.

Luo L, Cook N, Venkatachalam V, Martinez-Velazquez LA, Zhang X, Calvo AC, Hawk J, MacInnis BL, Frank M, Ng JH, Klein M, Gershow M, Hammarlund M, Goodman MB, Colón-Ramos DA, Zhang Y, Samuel AD.

Proc Natl Acad Sci U S A. 2014 Feb 18;111 (7) :2776-81. Epub 2014 Feb 3. PMID: 24550307

3.

The LIM and POU homeobox genes ttx-3 and unc-86 act as terminal selectors in distinct cholinergic and serotonergic neuron types.

Zhang F, Bhattacharya A, Nelson JC, Abe N, Gordon P, Lloret-Fernandez C, Maicas M, Flames N, Mann RS, Colón-Ramos DA, Hobert O.

Development. 2014 Jan;141 (2) :422-35. Epub 2013 Dec 18. PMID: 24353061

4.

The cell biology of synaptic specificity during development.

Christensen R, Shao Z, Colón-Ramos DA.

Curr Opin Neurobiol. 2013 Dec;23 (6) :1018-26. Epub 2013 Aug 6. PMID: 23932598

5.

Advanced optical imaging techniques for neurodevelopment.

Wu Y, Christensen R, Colón-Ramos D, Shroff H.

Curr Opin Neurobiol. 2013 Dec;23 (6) :1090-7. Epub 2013 Jul 5. PMID: 23831260

6.

Supporting diversity in science through social networking.

Guerrero-Medina G, Feliú-Mójer M, González-Espada W, Díaz-Muñoz G, López M, Díaz-Muñoz SL, Fortis-Santiago Y, Flores-Otero J, Craig D, Colón-Ramos DA.

PLoS Biol. 2013 Dec;11 (12) :e1001740. Epub 2013 Dec 31. PMID: 24391467

7.

Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.

Wu Y, Wawrzusin P, Senseney J, Fischer RS, Christensen R, Santella A, York AG, Winter PW, Waterman CM, Bao Z, Colón-Ramos DA, McAuliffe M, Shroff H.

Nat Biotechnol. 2013 Nov;31 (11) :1032-8. Epub 2013 Oct 13. PMID: 24108093

8.

Daniel Colon-Ramos: observing and making connections. Interview by Caitlin Sedwick.

Colón-Ramos D.

J Cell Biol. 2013 Oct 28;203 (2) :168-9. PMID: 24165932

9.

Synapse location during growth depends on glia location.

Shao Z, Watanabe S, Christensen R, Jorgensen EM, Colón-Ramos DA.

Cell. 2013 Jul 18;154 (2) :337-50. PMID: 23870123

10.

The actin cytoskeleton in presynaptic assembly.

Nelson JC, Stavoe AK, Colón-Ramos DA.

Cell Adh Migr. 2013 Jul-Aug;7 (4) :379-87. Epub 2013 Apr 29. PMID: 23628914

11.

Serotonergic neurosecretory synapse targeting is controlled by netrin-releasing guidepost neurons in Caenorhabditis elegans.

Nelson JC, Colón-Ramos DA.

J Neurosci. 2013 Jan 23;33 (4) :1366-76. PMID: 23345213

12.

Synaptic vesicle clustering requires a distinct MIG-10/Lamellipodin isoform and ABI-1 downstream from Netrin.

Stavoe AK, Nelson JC, Martínez-Velázquez LA, Klein M, Samuel AD, Colón-Ramos DA.

Genes Dev. 2012 Oct 1;26 (19) :2206-21. PMID: 23028145

13.

Netrin instructs synaptic vesicle clustering through Rac GTPase, MIG-10, and the actin cytoskeleton.

Stavoe AK, Colón-Ramos DA.

J Cell Biol. 2012 Apr 2;197 (1) :75-88. Epub 2012 Mar 26. PMID: 22451697

14.

Netrin (UNC-6) mediates dendritic self-avoidance.

Smith CJ, Watson JD, VanHoven MK, Colón-Ramos DA, Miller DM 3rd.

Nat Neurosci. 2012 Mar 18;15 (5) :731-7. Epub 2012 Mar 18. PMID: 22426253

15.

A conserved PTEN/FOXO pathway regulates neuronal morphology during C. elegans development.

Christensen R, de la Torre-Ubieta L, Bonni A, Colón-Ramos DA.

Development. 2011 Dec;138 (23) :5257-67. PMID: 22069193

16.

Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans.

Wu Y, Ghitani A, Christensen R, Santella A, Du Z, Rondeau G, Bao Z, Colón-Ramos D, Shroff H.

Proc Natl Acad Sci U S A. 2011 Oct 25;108 (43) :17708-13. Epub 2011 Oct 17. PMID: 22006307

17.

Nanoscopy in a living multicellular organism expressing GFP.

Rankin BR, Moneron G, Wurm CA, Nelson JC, Walter A, Schwarzer D, Schroeder J, Colón-Ramos DA, Hell SW.

Biophys J. 2011 Jun 22;100 (12) :L63-5. PMID: 21689517

18.

FISH and immunofluorescence staining in Chlamydomonas.

Uniacke J, Colón-Ramos D, Zerges W.

Methods Mol Biol. 2011;714 :15-29. PMID: 21431732

19.

Functional organization of a neural network for aversive olfactory learning in Caenorhabditis elegans.

Ha HI, Hendricks M, Shen Y, Gabel CV, Fang-Yen C, Qin Y, Colón-Ramos D, Shen K, Samuel AD, Zhang Y.

Neuron. 2010 Dec 22;68 (6) :1173-86. PMID: 21172617

20.

Synapse formation in developing neural circuits.

Colón-Ramos DA.

Curr Top Dev Biol. 2009;87 :53-79. PMID: 19427516

21.

Cellular conductors: glial cells as guideposts during neural circuit development.

Colón-Ramos DA, Shen K.

PLoS Biol. 2008 Apr 29;6 (4) :e112. PMID: 18447586

22.

Glia promote local synaptogenesis through UNC-6 (netrin) signaling in C. elegans.

Colón-Ramos DA, Margeta MA, Shen K.

Science. 2007 Oct 5;318 (5847) :103-6. PMID: 17916735

23.

Direct ribosomal binding by a cellular inhibitor of translation.

Colón-Ramos DA, Shenvi CL, Weitzel DH, Gan EC, Matts R, Cate J, Kornbluth S.

Nat Struct Mol Biol. 2006 Feb;13 (2) :103-11. Epub 2006 Jan 22. PMID: 16429152

24.

A GH3-like domain in reaper is required for mitochondrial localization and induction of IAP degradation.

Olson MR, Holley CL, Gan EC, Colón-Ramos DA, Kaplan B, Kornbluth S.

J Biol Chem. 2003 Nov 7;278 (45) :44758-68. Epub 2003 Aug 13. PMID: 12917412

25.

Inhibition of translation and induction of apoptosis by Bunyaviral nonstructural proteins bearing sequence similarity to reaper.

Colón-Ramos DA, Irusta PM, Gan EC, Olson MR, Song J, Morimoto RI, Elliott RM, Lombard M, Hollingsworth R, Hardwick JM, Smith GK, Kornbluth S.

Mol Biol Cell. 2003 Oct;14 (10) :4162-72. Epub 2003 Jul 11. PMID: 14517326

26.

Asymmetric distribution of nuclear pore complexes and the cytoplasmic localization of beta2-tubulin mRNA in Chlamydomonas reinhardtii.

Colón-Ramos DA, Salisbury JL, Sanders MA, Shenoy SM, Singer RH, García-Blanco MA.

Dev Cell. 2003 Jun;4 (6) :941-52. PMID: 12791277

27.

Reaper eliminates IAP proteins through stimulated IAP degradation and generalized translational inhibition.

Holley CL, Olson MR, Colón-Ramos DA, Kornbluth S.

Nat Cell Biol. 2002 Jun;4 (6) :439-44. PMID: 12021770