2024
Integrative deep learning with prior assisted feature selection
Wang F, Jia K, Li Y. Integrative deep learning with prior assisted feature selection. Statistics In Medicine 2024, 43: 3792-3814. PMID: 38923006, DOI: 10.1002/sim.10148.Peer-Reviewed Original ResearchDeep learningLearning methodsPerformance of feature selectionCapability of deep learningDeep learning methodsEnsemble learning methodFeature selectionPrior informationLearningIntegrated analysisSkin cutaneous melanomaDatasetRedundancyMethodSimulation studySuperioritySelectionCapabilityInformationFramework
2023
ZINBMM: a general mixture model for simultaneous clustering and gene selection using single-cell transcriptomic data
Li Y, Wu M, Ma S, Wu M. ZINBMM: a general mixture model for simultaneous clustering and gene selection using single-cell transcriptomic data. Genome Biology 2023, 24: 208. PMID: 37697330, PMCID: PMC10496184, DOI: 10.1186/s13059-023-03046-0.Peer-Reviewed Original ResearchConceptsSingle-cell transcriptomic dataCell heterogeneitySingle-cell RNA sequencing data analysisRNA sequencing data analysisCluster-specific genesGene selectionScRNA-seq datasetsSequencing data analysisNegative binomial mixture modelTranscriptomic dataCell lineagesCell typesBinomial mixture modelsBiological understandingBatch effectsDropout eventsLineagesGenesRaw countsCritical componentSelectionSystemic analysis