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Mark Hochstrasser's Publications

  • Limiting 20S proteasome assembly leads to unbalanced nucleo-cytoplasmic distribution of 26S/30S proteasomes and chronic proteotoxicity.Ruiz-Romero G, Berdún MD, Hochstrasser M, Salas-Pino S, Daga RR. iScience. 2024 Nov 15; 2024 Oct 4. PMID: 39473973.
  • Auto-sumoylation of the Ubc9 E2 SUMO-conjugating Enzyme Extends Cellular Lifespan.Ryu HY, Jeong DW, Kim SY, Jeoung SW, Zhao D, Knight J, Lam T, Jin JH, Lee HS, Hochstrasser M. Res Sq. 2024 Mar 21; 2024 Mar 21. PMID: 38562857.
  • Yeast 26S proteasome nuclear import is coupled to nucleus-specific degradation of the karyopherin adaptor protein Sts1.Breckel CA, Johnson ZM, Hickey CM, Hochstrasser M. Sci Rep. 2024 Jan 24; 2024 Jan 24. PMID: 38267508.
  • Sis2 regulates yeast replicative lifespan in a dose-dependent manner.Ölmez TT, Moreno DF, Liu P, Johnson ZM, McGinnis MM, Tu BP, Hochstrasser M, Acar M. Nat Commun. 2023 Nov 27; 2023 Nov 27. PMID: 38012152.
  • Molecular Biology of Cytoplasmic Incompatibility Caused by Wolbachia Endosymbionts.Hochstrasser M. Annu Rev Microbiol. 2023 Sep 15; 2023 Jun 7. PMID: 37285552.
  • Species-specific protein-protein interactions govern the humanization of the 20S proteasome in yeast.Sultana S, Abdullah M, Li J, Hochstrasser M, Kachroo AH. Genetics. 2023 Aug 31. PMID: 37364278.
  • Proteasomes: Isolation and Activity Assays.Li Y, Tomko RJ Jr, Hochstrasser M. Curr Protoc. 2023 Apr. PMID: 37026813.
  • Ectopic RING activity at the ER membrane differentially impacts ERAD protein quality control pathways.Mehrtash AB, Hochstrasser M. J Biol Chem. 2023 Mar; 2023 Jan 19. PMID: 36682496.
  • Orientia tsutsugamushi OtDUB Is Expressed and Interacts with Adaptor Protein Complexes during Infection.Adcox HE, Berk JM, Hochstrasser M, Carlyon JA. Infect Immun. 2022 Dec 15; 2022 Nov 14. PMID: 36374099.
  • Elements of the ERAD ubiquitin ligase Doa10 regulating sequential poly-ubiquitylation of its targets.Mehrtash AB, Hochstrasser M. iScience. 2022 Nov 18; 2022 Oct 13. PMID: 36325070.
  • OtDUB from the Human Pathogen Orientia tsutsugamushi Modulates Host Membrane Trafficking by Multiple Mechanisms.Berk JM, Lee MJ, Zhang M, Lim C, Hochstrasser M. Mol Cell Biol. 2022 Jul 21; 2022 Jun 21. PMID: 35727026.
  • A versatile new tool derived from a bacterial deubiquitylase to detect and purify ubiquitylated substrates and their interacting proteins.Zhang M, Berk JM, Mehrtash AB, Kanyo J, Hochstrasser M. PLoS Biol. 2022 Jun; 2022 Jun 30. PMID: 35771886.
  • Cytoplasmic incompatibility: A Wolbachia toxin-antidote mechanism comes into view.Hochstrasser M. Curr Biol. 2022 Mar 28. PMID: 35349818.
  • Crystal Structures of Wolbachia CidA and CidB Reveal Determinants of Bacteria-induced Cytoplasmic Incompatibility and Rescue.Wang H, Xiao Y, Chen X, Zhang M, Sun G, Wang F, Wang L, Zhang H, Zhang X, Yang X, Li W, Wei Y, Yao D, Zhang B, Li J, Cui W, Wang F, Chen C, Shen W, Su D, Bai F, Huang J, Ye S, Zhang L, Ji X, Wang W, Wang Z, Hochstrasser M, Yang H. Nat Commun. 2022 Mar 25; 2022 Mar 25. PMID: 35338130.
  • The CinB Nuclease from wNo Wolbachia Is Sufficient for Induction of Cytoplasmic Incompatibility in Drosophila.Sun G, Zhang M, Chen H, Hochstrasser M. mBio. 2022 Feb 22; 2022 Jan 25. PMID: 35073749.
  • Selective microautophagy of proteasomes is initiated by ESCRT-0 and is promoted by proteasome ubiquitylation.Li J, Hochstrasser M. J Cell Sci. 2022 Feb 15; 2022 Feb 21. PMID: 35099016.
  • Ubiquitin Ligase Redundancy and Nuclear-Cytoplasmic Localization in Yeast Protein Quality Control.Breckel CA, Hochstrasser M. Biomolecules. 2021 Dec 3; 2021 Dec 3. PMID: 34944465.
  • Structural and mechanistic insights into the complexes formed by Wolbachia cytoplasmic incompatibility factors.Xiao Y, Chen H, Wang H, Zhang M, Chen X, Berk JM, Zhang L, Wei Y, Li W, Cui W, Wang F, Wang Q, Cui C, Li T, Chen C, Ye S, Zhang L, Ji X, Huang J, Wang W, Wang Z, Hochstrasser M, Yang H. Proc Natl Acad Sci U S A. 2021 Oct 12. PMID: 34620712.
  • Yeast Nst1 is a novel component of P-bodies and is a specific suppressor of proteasome base assembly defects.Cheng CL, Wong MK, Hochstrasser M. Mol Biol Cell. 2021 Oct 1; 2021 Aug 4. PMID: 34347506.
  • Histone sumoylation and chromatin dynamics.Ryu HY, Hochstrasser M. Nucleic Acids Res. 2021 Jun 21. PMID: 33885816.
  • Protein quality control degron-containing substrates are differentially targeted in the cytoplasm and nucleus by ubiquitin ligases.Hickey CM, Breckel C, Zhang M, Theune WC, Hochstrasser M. Genetics. 2021 Mar 3. PMID: 33683364.
  • Conserved proline residues in the coiled coil-OB domain linkers of Rpt proteins facilitate eukaryotic proteasome base assembly.Cheng CL, Wong MK, Li Y, Hochstrasser M. J Biol Chem. 2021 Jan-Jun; 2021 Apr 14. PMID: 33862083.
  • Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)(1).Klionsky DJ, Abdel-Aziz AK, Abdelfatah S, Abdellatif M, Abdoli A, Abel S, Abeliovich H, Abildgaard MH, Abudu YP, Acevedo-Arozena A, Adamopoulos IE, Adeli K, Adolph TE, Adornetto A, Aflaki E, Agam G, Agarwal A, Aggarwal BB, Agnello M, Agostinis P, Agrewala JN, Agrotis A, Aguilar PV, Ahmad ST, Ahmed ZM, Ahumada-Castro U, Aits S, Aizawa S, Akkoc Y, Akoumianaki T, Akpinar HA, Al-Abd AM, Al-Akra L, Al-Gharaibeh A, Alaoui-Jamali MA, Alberti S, Alcocer-Gómez E, Alessandri C, Ali M, Alim Al-Bari MA, Aliwaini S, Alizadeh J, Almacellas E, Almasan A, Alonso A, Alonso GD, Altan-Bonnet N, Altieri DC, Álvarez ÉMC, Alves S, Alves da Costa C, Alzaharna MM, Amadio M, Amantini C, Amaral C, Ambrosio S, Amer AO, Ammanathan V, An Z, Andersen SU, Andrabi SA, Andrade-Silva M, Andres AM, Angelini S, Ann D, Anozie UC, Ansari MY, Antas P, Antebi A, Antón Z, Anwar T, Apetoh L, Apostolova N, Araki T, Araki Y, Arasaki K, Araújo WL, Araya J, Arden C, Arévalo MA, Arguelles S, Arias E, Arikkath J, Arimoto H, Ariosa AR, Armstrong-James D, Arnauné-Pelloquin L, Aroca A, Arroyo DS, Arsov I, Artero R, Asaro DML, Aschner M, Ashrafizadeh M, Ashur-Fabian O, Atanasov AG, Au AK, Auberger P, Auner HW, Aurelian L, Autelli R, Avagliano L, Ávalos Y, Aveic S, Aveleira CA, Avin-Wittenberg T, Aydin Y, Ayton S, Ayyadevara S, Azzopardi M, Baba M, Backer JM, Backues SK, Bae DH, Bae ON, Bae SH, Baehrecke EH, Baek A, Baek SH, Baek SH, Bagetta G, Bagniewska-Zadworna A, Bai H, Bai J, Bai X, Bai Y, Bairagi N, Baksi S, Balbi T, Baldari CT, Balduini W, Ballabio A, Ballester M, Balazadeh S, Balzan R, Bandopadhyay R, Banerjee S, Banerjee S, Bánréti Á, Bao Y, Baptista MS, Baracca A, Barbati C, Bargiela A, Barilà D, Barlow PG, Barmada SJ, Barreiro E, Barreto GE, Bartek J, Bartel B, Bartolome A, Barve GR, Basagoudanavar SH, Bassham DC, Bast RC Jr, Basu A, Batoko H, Batten I, Baulieu EE, Baumgarner BL, Bayry J, Beale R, Beau I, Beaumatin F, Bechara LRG, Beck GR Jr, Beers MF, Begun J, Behrends C, Behrens GMN, Bei R, Bejarano E, Bel S, Behl C, Belaid A, Belgareh-Touzé N, Bellarosa C, Belleudi F, Belló Pérez M, Bello-Morales R, Beltran JSO, Beltran S, Benbrook DM, Bendorius M, Benitez BA, Benito-Cuesta I, Bensalem J, Berchtold MW, Berezowska S, Bergamaschi D, Bergami M, Bergmann A, Berliocchi L, Berlioz-Torrent C, Bernard A, Berthoux L, Besirli CG, Besteiro S, Betin VM, Beyaert R, Bezbradica JS, Bhaskar K, Bhatia-Kissova I, Bhattacharya R, Bhattacharya S, Bhattacharyya S, Bhuiyan MS, Bhutia SK, Bi L, Bi X, Biden TJ, Bijian K, Billes VA, Binart N, Bincoletto C, Birgisdottir AB, Bjorkoy G, Blanco G, Blas-Garcia A, Blasiak J, Blomgran R, Blomgren K, Blum JS, Boada-Romero E, Boban M, Boesze-Battaglia K, Boeuf P, Boland B, Bomont P, Bonaldo P, Bonam SR, Bonfili L, Bonifacino JS, Boone BA, Bootman MD, Bordi M, Borner C, Bornhauser BC, Borthakur G, Bosch J, Bose S, Botana LM, Botas J, Boulanger CM, Boulton ME, Bourdenx M, Bourgeois B, Bourke NM, Bousquet G, Boya P, Bozhkov PV, Bozi LHM, Bozkurt TO, Brackney DE, Brandts CH, Braun RJ, Braus GH, Bravo-Sagua R, Bravo-San Pedro JM, Brest P, Bringer MA, Briones-Herrera A, Broaddus VC, Brodersen P, Brodsky JL, Brody SL, Bronson PG, Bronstein JM, Brown CN, Brown RE, Brum PC, Brumell JH, Brunetti-Pierri N, Bruno D, Bryson-Richardson RJ, Bucci C, Buchrieser C, Bueno M, Buitrago-Molina LE, Buraschi S, Buch S, Buchan JR, Buckingham EM, Budak H, Budini M, Bultynck G, Burada F, Burgoyne JR, Burón MI, Bustos V, Büttner S, Butturini E, Byrd A, Cabas I, Cabrera-Benitez S, Cadwell K, Cai J, Cai L, Cai Q, Cairó M, Calbet JA, Caldwell GA, Caldwell KA, Call JA, Calvani R, Calvo AC, Calvo-Rubio Barrera M, Camara NO, Camonis JH, Camougrand N, Campanella M, Campbell EM, Campbell-Valois FX, Campello S, Campesi I, Campos JC, Camuzard O, Cancino J, Candido de Almeida D, Canesi L, Caniggia I, Canonico B, Cantí C, Cao B, Caraglia M, Caramés B, Carchman EH, Cardenal-Muñoz E, Cardenas C, Cardenas L, Cardoso SM, Carew JS, Carle GF, Carleton G, Carloni S, Carmona-Gutierrez D, Carneiro LA, Carnevali O, Carosi JM, Carra S, Carrier A, Carrier L, Carroll B, Carter AB, Carvalho AN, Casanova M, Casas C, Casas J, Cassioli C, Castillo EF, Castillo K, Castillo-Lluva S, Castoldi F, Castori M, Castro AF, Castro-Caldas M, Castro-Hernandez J, Castro-Obregon S, Catz SD, Cavadas C, Cavaliere F, Cavallini G, Cavinato M, Cayuela ML, Cebollada Rica P, Cecarini V, Cecconi F, Cechowska-Pasko M, Cenci S, Ceperuelo-Mallafré V, Cerqueira JJ, Cerutti JM, Cervia D, Cetintas VB, Cetrullo S, Chae HJ, Chagin AS, Chai CY, Chakrabarti G, Chakrabarti O, Chakraborty T, Chakraborty T, Chami M, Chamilos G, Chan DW, Chan EYW, Chan ED, Chan HYE, Chan HH, Chan H, Chan MTV, Chan YS, Chandra PK, Chang CP, Chang C, Chang HC, Chang K, Chao J, Chapman T, Charlet-Berguerand N, Chatterjee S, Chaube SK, Chaudhary A, Chauhan S, Chaum E, Checler F, Cheetham ME, Chen CS, Chen GC, Chen JF, Chen LL, Chen L, Chen L, Chen M, Chen MK, Chen N, Chen Q, Chen RH, Chen S, Chen W, Chen W, Chen XM, Chen XW, Chen X, Chen Y, Chen YG, Chen Y, Chen Y, Chen YJ, Chen YQ, Chen ZS, Chen Z, Chen ZH, Chen ZJ, Chen Z, Cheng H, Cheng J, Cheng SY, Cheng W, Cheng X, Cheng XT, Cheng Y, Cheng Z, Chen Z, Cheong H, Cheong JK, Chernyak BV, Cherry S, Cheung CFR, Cheung CHA, Cheung KH, Chevet E, Chi RJ, Chiang AKS, Chiaradonna F, Chiarelli R, Chiariello M, Chica N, Chiocca S, Chiong M, Chiou SH, Chiramel AI, Chiurchiù V, Cho DH, Choe SK, Choi AMK, Choi ME, Choudhury KR, Chow NS, Chu CT, Chua JP, Chua JJE, Chung H, Chung KP, Chung S, Chung SH, Chung YL, Cianfanelli V, Ciechomska IA, Cifuentes M, Cinque L, Cirak S, Cirone M, Clague MJ, Clarke R, Clementi E, Coccia EM, Codogno P, Cohen E, Cohen MM, Colasanti T, Colasuonno F, Colbert RA, Colell A, Čolić M, Coll NS, Collins MO, Colombo MI, Colón-Ramos DA, Combaret L, Comincini S, Cominetti MR, Consiglio A, Conte A, Conti F, Contu VR, Cookson MR, Coombs KM, Coppens I, Corasaniti MT, Corkery DP, Cordes N, Cortese K, Costa MDC, Costantino S, Costelli P, Coto-Montes A, Crack PJ, Crespo JL, Criollo A, Crippa V, Cristofani R, Csizmadia T, Cuadrado A, Cui B, Cui J, Cui Y, Cui Y, Culetto E, Cumino AC, Cybulsky AV, Czaja MJ, Czuczwar SJ, D'Adamo S, D'Amelio M, D'Arcangelo D, D'Lugos AC, D'Orazi G, da Silva JA, Dafsari HS, Dagda RK, Dagdas Y, Daglia M, Dai X, Dai Y, Dai Y, Dal Col J, Dalhaimer P, Dalla Valle L, Dallenga T, Dalmasso G, Damme M, Dando I, Dantuma NP, Darling AL, Das H, Dasarathy S, Dasari SK, Dash S, Daumke O, Dauphinee AN, Davies JS, Dávila VA, Davis RJ, Davis T, Dayalan Naidu S, De Amicis F, De Bosscher K, De Felice F, De Franceschi L, De Leonibus C, de Mattos Barbosa MG, De Meyer GRY, De Milito A, De Nunzio C, De Palma C, De Santi M, De Virgilio C, De Zio D, Debnath J, DeBosch BJ, Decuypere JP, Deehan MA, Deflorian G, DeGregori J, Dehay B, Del Rio G, Delaney JR, Delbridge LMD, Delorme-Axford E, Delpino MV, Demarchi F, Dembitz V, Demers ND, Deng H, Deng Z, Dengjel J, Dent P, Denton D, DePamphilis ML, Der CJ, Deretic V, Descoteaux A, Devis L, Devkota S, Devuyst O, Dewson G, Dharmasivam M, Dhiman R, di Bernardo D, Di Cristina M, Di Domenico F, Di Fazio P, Di Fonzo A, Di Guardo G, Di Guglielmo GM, Di Leo L, Di Malta C, Di Nardo A, Di Rienzo M, Di Sano F, Diallinas G, Diao J, Diaz-Araya G, Díaz-Laviada I, Dickinson JM, Diederich M, Dieudé M, Dikic I, Ding S, Ding WX, Dini L, Dinić J, Dinic M, Dinkova-Kostova AT, Dionne MS, Distler JHW, Diwan A, Dixon IMC, Djavaheri-Mergny M, Dobrinski I, Dobrovinskaya O, Dobrowolski R, Dobson RCJ, Đokić J, Dokmeci Emre S, Donadelli M, Dong B, Dong X, Dong Z, Dorn Ii GW, Dotsch V, Dou H, Dou J, Dowaidar M, Dridi S, Drucker L, Du A, Du C, Du G, Du HN, Du LL, du Toit A, Duan SB, Duan X, Duarte SP, Dubrovska A, Dunlop EA, Dupont N, Durán RV, Dwarakanath BS, Dyshlovoy SA, Ebrahimi-Fakhari D, Eckhart L, Edelstein CL, Efferth T, Eftekharpour E, Eichinger L, Eid N, Eisenberg T, Eissa NT, Eissa S, Ejarque M, El Andaloussi A, El-Hage N, El-Naggar S, Eleuteri AM, El-Shafey ES, Elgendy M, Eliopoulos AG, Elizalde MM, Elks PM, Elsasser HP, Elsherbiny ES, Emerling BM, Emre NCT, Eng CH, Engedal N, Engelbrecht AM, Engelsen AST, Enserink JM, Escalante R, Esclatine A, Escobar-Henriques M, Eskelinen EL, Espert L, Eusebio MO, Fabrias G, Fabrizi C, Facchiano A, Facchiano F, Fadeel B, Fader C, Faesen AC, Fairlie WD, Falcó A, Falkenburger BH, Fan D, Fan J, Fan Y, Fang EF, Fang Y, Fang Y, Fanto M, Farfel-Becker T, Faure M, Fazeli G, Fedele AO, Feldman AM, Feng D, Feng J, Feng L, Feng Y, Feng Y, Feng W, Fenz Araujo T, Ferguson TA, Fernández ÁF, Fernandez-Checa JC, Fernández-Veledo S, Fernie AR, Ferrante AW Jr, Ferraresi A, Ferrari MF, Ferreira JCB, Ferro-Novick S, Figueras A, Filadi R, Filigheddu N, Filippi-Chiela E, Filomeni G, Fimia GM, Fineschi V, Finetti F, Finkbeiner S, Fisher EA, Fisher PB, Flamigni F, Fliesler SJ, Flo TH, Florance I, Florey O, Florio T, Fodor E, Follo C, Fon EA, Forlino A, Fornai F, Fortini P, Fracassi A, Fraldi A, Franco B, Franco R, Franconi F, Frankel LB, Friedman SL, Fröhlich LF, Frühbeck G, Fuentes JM, Fujiki Y, Fujita N, Fujiwara Y, Fukuda M, Fulda S, Furic L, Furuya N, Fusco C, Gack MU, Gaffke L, Galadari S, Galasso A, Galindo MF, Gallolu Kankanamalage S, Galluzzi L, Galy V, Gammoh N, Gan B, Ganley IG, Gao F, Gao H, Gao M, Gao P, Gao SJ, Gao W, Gao X, Garcera A, Garcia MN, Garcia VE, García-Del Portillo F, Garcia-Escudero V, Garcia-Garcia A, Garcia-Macia M, García-Moreno D, Garcia-Ruiz C, García-Sanz P, Garg AD, Gargini R, Garofalo T, Garry RF, Gassen NC, Gatica D, Ge L, Ge W, Geiss-Friedlander R, Gelfi C, Genschik P, Gentle IE, Gerbino V, Gerhardt C, Germain K, Germain M, Gewirtz DA, Ghasemipour Afshar E, Ghavami S, Ghigo A, Ghosh M, Giamas G, Giampietri C, Giatromanolaki A, Gibson GE, Gibson SB, Ginet V, Giniger E, Giorgi C, Girao H, Girardin SE, Giridharan M, Giuliano S, Giulivi C, Giuriato S, Giustiniani J, Gluschko A, Goder V, Goginashvili A, Golab J, Goldstone DC, Golebiewska A, Gomes LR, Gomez R, Gómez-Sánchez R, Gomez-Puerto MC, Gomez-Sintes R, Gong Q, Goni FM, González-Gallego J, Gonzalez-Hernandez T, Gonzalez-Polo RA, Gonzalez-Reyes JA, González-Rodríguez P, Goping IS, Gorbatyuk MS, Gorbunov NV, Görgülü K, Gorojod RM, Gorski SM, Goruppi S, Gotor C, Gottlieb RA, Gozes I, Gozuacik D, Graef M, Gräler MH, Granatiero V, Grasso D, Gray JP, Green DR, Greenhough A, Gregory SL, Griffin EF, Grinstaff MW, Gros F, Grose C, Gross AS, Gruber F, Grumati P, Grune T, Gu X, Guan JL, Guardia CM, Guda K, Guerra F, Guerri C, Guha P, Guillén C, Gujar S, Gukovskaya A, Gukovsky I, Gunst J, Günther A, Guntur AR, Guo C, Guo C, Guo H, Guo LW, Guo M, Gupta P, Gupta SK, Gupta S, Gupta VB, Gupta V, Gustafsson AB, Gutterman DD, H B R, Haapasalo A, Haber JE, Hać A, Hadano S, Hafrén AJ, Haidar M, Hall BS, Halldén G, Hamacher-Brady A, Hamann A, Hamasaki M, Han W, Hansen M, Hanson PI, Hao Z, Harada M, Harhaji-Trajkovic L, Hariharan N, Haroon N, Harris J, Hasegawa T, Hasima Nagoor N, Haspel JA, Haucke V, Hawkins WD, Hay BA, Haynes CM, Hayrabedyan SB, Hays TS, He C, He Q, He RR, He YW, He YY, Heakal Y, Heberle AM, Hejtmancik JF, Helgason GV, Henkel V, Herb M, Hergovich A, Herman-Antosiewicz A, Hernández A, Hernandez C, Hernandez-Diaz S, Hernandez-Gea V, Herpin A, Herreros J, Hervás JH, Hesselson D, Hetz C, Heussler VT, Higuchi Y, Hilfiker S, Hill JA, Hlavacek WS, Ho EA, Ho IHT, Ho PW, Ho SL, Ho WY, Hobbs GA, Hochstrasser M, Hoet PHM, Hofius D, Hofman P, Höhn A, Holmberg CI, Hombrebueno JR, Yi-Ren Hong CH, Hooper LV, Hoppe T, Horos R, Hoshida Y, Hsin IL, Hsu HY, Hu B, Hu D, Hu LF, Hu MC, Hu R, Hu W, Hu YC, Hu ZW, Hua F, Hua J, Hua Y, Huan C, Huang C, Huang C, Huang C, Huang C, Huang H, Huang K, Huang MLH, Huang R, Huang S, Huang T, Huang X, Huang YJ, Huber TB, Hubert V, Hubner CA, Hughes SM, Hughes WE, Humbert M, Hummer G, Hurley JH, Hussain S, Hussain S, Hussey PJ, Hutabarat M, Hwang HY, Hwang S, Ieni A, Ikeda F, Imagawa Y, Imai Y, Imbriano C, Imoto M, Inman DM, Inoki K, Iovanna J, Iozzo RV, Ippolito G, Irazoqui JE, Iribarren P, Ishaq M, Ishikawa M, Ishimwe N, Isidoro C, Ismail N, Issazadeh-Navikas S, Itakura E, Ito D, Ivankovic D, Ivanova S, Iyer AKV, Izquierdo JM, Izumi M, Jäättelä M, Jabir MS, Jackson WT, Jacobo-Herrera N, Jacomin AC, Jacquin E, Jadiya P, Jaeschke H, Jagannath C, Jakobi AJ, Jakobsson J, Janji B, Jansen-Dürr P, Jansson PJ, Jantsch J, Januszewski S, Jassey A, Jean S, Jeltsch-David H, Jendelova P, Jenny A, Jensen TE, Jessen N, Jewell JL, Ji J, Jia L, Jia R, Jiang L, Jiang Q, Jiang R, Jiang T, Jiang X, Jiang Y, Jimenez-Sanchez M, Jin EJ, Jin F, Jin H, Jin L, Jin L, Jin M, Jin S, Jo EK, Joffre C, Johansen T, Johnson GVW, Johnston SA, Jokitalo E, Jolly MK, Joosten LAB, Jordan J, Joseph B, Ju D, Ju JS, Ju J, Juárez E, Judith D, Juhász G, Jun Y, Jung CH, Jung SC, Jung YK, Jungbluth H, Jungverdorben J, Just S, Kaarniranta K, Kaasik A, Kabuta T, Kaganovich D, Kahana A, Kain R, Kajimura S, Kalamvoki M, Kalia M, Kalinowski DS, Kaludercic N, Kalvari I, Kaminska J, Kaminskyy VO, Kanamori H, Kanasaki K, Kang C, Kang R, Kang SS, Kaniyappan S, Kanki T, Kanneganti TD, Kanthasamy AG, Kanthasamy A, Kantorow M, Kapuy O, Karamouzis MV, Karim MR, Karmakar P, Katare RG, Kato M, Kaufmann SHE, Kauppinen A, Kaushal GP, Kaushik S, Kawasaki K, Kazan K, Ke PY, Keating DJ, Keber U, Kehrl JH, Keller KE, Keller CW, Kemper JK, Kenific CM, Kepp O, Kermorgant S, Kern A, Ketteler R, Keulers TG, Khalfin B, Khalil H, Khambu B, Khan SY, Khandelwal VKM, Khandia R, Kho W, Khobrekar NV, Khuansuwan S, Khundadze M, Killackey SA, Kim D, Kim DR, Kim DH, Kim DE, Kim EY, Kim EK, Kim HR, Kim HS, Hyung-Ryong Kim, Kim JH, Kim JK, Kim JH, Kim J, Kim JH, Kim KI, Kim PK, Kim SJ, Kimball SR, Kimchi A, Kimmelman AC, Kimura T, King MA, Kinghorn KJ, Kinsey CG, Kirkin V, Kirshenbaum LA, Kiselev SL, Kishi S, Kitamoto K, Kitaoka Y, Kitazato K, Kitsis RN, Kittler JT, Kjaerulff O, Klein PS, Klopstock T, Klucken J, Knævelsrud H, Knorr RL, Ko BCB, Ko F, Ko JL, Kobayashi H, Kobayashi S, Koch I, Koch JC, Koenig U, Kögel D, Koh YH, Koike M, Kohlwein SD, Kocaturk NM, Komatsu M, König J, Kono T, Kopp BT, Korcsmaros T, Korkmaz G, Korolchuk VI, Korsnes MS, Koskela A, Kota J, Kotake Y, Kotler ML, Kou Y, Koukourakis MI, Koustas E, Kovacs AL, Kovács T, Koya D, Kozako T, Kraft C, Krainc D, Krämer H, Krasnodembskaya AD, Kretz-Remy C, Kroemer G, Ktistakis NT, Kuchitsu K, Kuenen S, Kuerschner L, Kukar T, Kumar A, Kumar A, Kumar D, Kumar D, Kumar S, Kume S, Kumsta C, Kundu CN, Kundu M, Kunnumakkara AB, Kurgan L, Kutateladze TG, Kutlu O, Kwak S, Kwon HJ, Kwon TK, Kwon YT, Kyrmizi I, La Spada A, Labonté P, Ladoire S, Laface I, Lafont F, Lagace DC, Lahiri V, Lai Z, Laird AS, Lakkaraju A, Lamark T, Lan SH, Landajuela A, Lane DJR, Lane JD, Lang CH, Lange C, Langel Ü, Langer R, Lapaquette P, Laporte J, LaRusso NF, Lastres-Becker I, Lau WCY, Laurie GW, Lavandero S, Law BYK, Law HK, Layfield R, Le W, Le Stunff H, Leary 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Zoladek T, Zong WX, Zorov DB, Zorzano A, Zou W, Zou Z, Zou Z, Zuryn S, Zwerschke W, Brand-Saberi B, Dong XC, Kenchappa CS, Li Z, Lin Y, Oshima S, Rong Y, Sluimer JC, Stallings CL, Tong CK. Autophagy. 2021 Jan; 2021 Feb 8. PMID: 33634751.
  • Histone sumoylation promotes Set3 histone-deacetylase complex-mediated transcriptional regulation.Ryu HY, Zhao D, Li J, Su D, Hochstrasser M. Nucleic Acids Res. 2020 Dec 2. PMID: 33231641.
  • Crystal structure of a guanine nucleotide exchange factor encoded by the scrub typhus pathogen Orientia tsutsugamushi.Lim C, Berk JM, Blaise A, Bircher J, Koleske AJ, Hochstrasser M, Xiong Y. Proc Natl Acad Sci U S A. 2020 Dec 1; 2020 Nov 12. PMID: 33184172.
  • Epigenetic Mechanisms Contribute to Evolutionary Adaptation of Gene Network Activity under Environmental Selection.Luo X, Song R, Moreno DF, Ryu HY, Hochstrasser M, Acar M. Cell Rep. 2020 Oct 27. PMID: 33113358.
  • Microautophagy regulates proteasome homeostasis.Li J, Hochstrasser M. Curr Genet. 2020 Aug; 2020 Feb 20. PMID: 32077993.
  • The Biochemistry of Cytoplasmic Incompatibility Caused by Endosymbiotic Bacteria.Chen H, Zhang M, Hochstrasser M. Genes (Basel). 2020 Jul 25; 2020 Jul 25. PMID: 32722516.
  • SUMO and cellular adaptive mechanisms.Ryu HY, Ahn SH, Hochstrasser M. Exp Mol Med. 2020 Jun; 2020 Jun 26. PMID: 32591648.
  • A deubiquitylase with an unusually high-affinity ubiquitin-binding domain from the scrub typhus pathogen Orientia tsutsugamushi.Berk JM, Lim C, Ronau JA, Chaudhuri A, Chen H, Beckmann JF, Loria JP, Xiong Y, Hochstrasser M. Nat Commun. 2020 May 11; 2020 May 11. PMID: 32393759.
  • The Sts1 nuclear import adapter uses a non-canonical bipartite nuclear localization signal and is directly degraded by the proteasome.Budenholzer L, Breckel C, Hickey CM, Hochstrasser M. J Cell Sci. 2020 Mar 19; 2020 Mar 19. PMID: 32041904.
  • Endoplasmic reticulum stress differentially inhibits endoplasmic reticulum and inner nuclear membrane protein quality control degradation pathways.Buchanan BW, Mehrtash AB, Broshar CL, Runnebohm AM, Snow BJ, Scanameo LN, Hochstrasser M, Rubenstein EM. J Biol Chem. 2019 Dec 20; 2019 Nov 13. PMID: 31723032.
  • The Wolbachia cytoplasmic incompatibility enzyme CidB targets nuclear import and protamine-histone exchange factors.Beckmann JF, Sharma GD, Mendez L, Chen H, Hochstrasser M. Elife. 2019 Nov 27; 2019 Nov 27. PMID: 31774393.
  • AMPK regulates ESCRT-dependent microautophagy of proteasomes concomitant with proteasome storage granule assembly during glucose starvation.Li J, Breker M, Graham M, Schuldiner M, Hochstrasser M. PLoS Genet. 2019 Nov; 2019 Nov 18. PMID: 31738769.
  • A Wolbachia nuclease and its binding partner provide a distinct mechanism for cytoplasmic incompatibility.Chen H, Ronau JA, Beckmann JF, Hochstrasser M. Proc Natl Acad Sci U S A. 2019 Oct 29; 2019 Oct 15. PMID: 31615889.
  • Ubiquitin-dependent protein degradation at the endoplasmic reticulum and nuclear envelope.Mehrtash AB, Hochstrasser M. Semin Cell Dev Biol. 2019 Sep; 2018 Oct 9. PMID: 30278225.
  • The Ulp2 SUMO protease promotes transcription elongation through regulation of histone sumoylation.Ryu HY, Su D, Wilson-Eisele NR, Zhao D, López-Giráldez F, Hochstrasser M. EMBO J. 2019 Aug 15; 2019 Jul 17. PMID: 31313851.
  • Caution Does Not Preclude Predictive and Testable Models of Cytoplasmic Incompatibility: A Reply to Shropshire et al.Beckmann JF, Bonneau M, Chen H, Hochstrasser M, Poinsot D, Merçot H, Weill M, Sicard M, Charlat S. Trends Genet. 2019 Jun; 2019 Apr 9. PMID: 30979535.
  • The Toxin-Antidote Model of Cytoplasmic Incompatibility: Genetics and Evolutionary Implications.Beckmann JF, Bonneau M, Chen H, Hochstrasser M, Poinsot D, Merçot H, Weill M, Sicard M, Charlat S. Trends Genet. 2019 Mar; 2019 Jan 23. PMID: 30685209.
  • Cholesterol increases protein levels of the E3 ligase MARCH6 and thereby stimulates protein degradation.Sharpe LJ, Howe V, Scott NA, Luu W, Phan L, Berk JM, Hochstrasser M, Brown AJ. J Biol Chem. 2019 Feb 15; 2018 Dec 13. PMID: 30545937.
  • Preface.Hochstrasser M Editor. Methods Enzymol. 2019. PMID: 30910032.
  • Preface.Hochstrasser M. Methods Enzymol. 2019. PMID: 30850064.
  • Distinct adaptive mechanisms drive recovery from aneuploidy caused by loss of the Ulp2 SUMO protease.Ryu HY, López-Giráldez F, Knight J, Hwang SS, Renner C, Kreft SG, Hochstrasser M. Nat Commun. 2018 Dec 21; 2018 Dec 21. PMID: 30575729.
  • Rapid degradation of progressive ankylosis protein (ANKH) in craniometaphyseal dysplasia.Kanaujiya J, Bastow E, Luxmi R, Hao Z, Zattas D, Hochstrasser M, Reichenberger EJ, Chen IP. Sci Rep. 2018 Oct 24; 2018 Oct 24. PMID: 30356088.
  • DNA binding by the MATα2 transcription factor controls its access to alternative ubiquitin-modification pathways.Hickey CM, Xie Y, Hochstrasser M. Mol Biol Cell. 2018 Mar 1; 2018 Jan 3. PMID: 29298839.
  • Proteasome Structure and Assembly.Budenholzer L, Cheng CL, Li Y, Hochstrasser M. J Mol Biol. 2017 Nov 10; 2017 Jun 3. PMID: 28583440.
  • The DUB blade goes snicker-snack: Novel ubiquitin cleavage by a Legionella effector protein.Ronau JA, Hochstrasser M. Cell Res. 2017 Jul; 2017 Jun 2. PMID: 28574056.
  • Adaptive aneuploidy counters a dysregulated SUMO system.Ryu HY, Hochstrasser M. Cell Cycle. 2017 Mar 4; 2016 Nov 18. PMID: 27860533.
  • A Wolbachia deubiquitylating enzyme induces cytoplasmic incompatibility.Beckmann JF, Ronau JA, Hochstrasser M. Nat Microbiol. 2017 Mar 1; 2017 Mar 1. PMID: 28248294.
  • Gyre and gimble in the proteasome.Hochstrasser M. Proc Natl Acad Sci U S A. 2016 Nov 15; 2016 Nov 3. PMID: 27810957.
  • Loss of the SUMO protease Ulp2 triggers a specific multichromosome aneuploidy.Ryu HY, Wilson NR, Mehta S, Hwang SS, Hochstrasser M. Genes Dev. 2016 Aug 15; 2016 Sep 1. PMID: 27585592.
  • Protein Modification: Bacterial Effectors Rewrite the Rules of Ubiquitylation.Berk JM, Hochstrasser M. Curr Biol. 2016 Jul 11. PMID: 27404243.
  • A Conserved C-terminal Element in the Yeast Doa10 and Human MARCH6 Ubiquitin Ligases Required for Selective Substrate Degradation.Zattas D, Berk JM, Kreft SG, Hochstrasser M. J Biol Chem. 2016 Jun 3; 2016 Apr 11. PMID: 27068744.
  • Recent progress in ubiquitin and ubiquitin-like protein (Ubl) signaling.Hu R, Hochstrasser M. Cell Res. 2016 Apr. PMID: 27033807.
  • Substrate specificity of the ubiquitin and Ubl proteases.Ronau JA, Beckmann JF, Hochstrasser M. Cell Res. 2016 Apr; 2016 Mar 25. PMID: 27012468.
  • SUMO Pathway Modulation of Regulatory Protein Binding at the Ribosomal DNA Locus in Saccharomyces cerevisiae.Gillies J, Hickey CM, Su D, Wu Z, Peng J, Hochstrasser M. Genetics. 2016 Apr; 2016 Feb 2. PMID: 26837752.
  • Assembly of an Evolutionarily Conserved Alternative Proteasome Isoform in Human Cells.Padmanabhan A, Vuong SA, Hochstrasser M. Cell Rep. 2016 Mar 29; 2016 Mar 22. PMID: 26997268.
  • A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome.Huber EM, Heinemeyer W, Li X, Arendt CS, Hochstrasser M, Groll M. Nat Commun. 2016 Mar 11; 2016 Mar 11. PMID: 26964885.
  • Distinct Elements in the Proteasomal β5 Subunit Propeptide Required for Autocatalytic Processing and Proteasome Assembly.Li X, Li Y, Arendt CS, Hochstrasser M. J Biol Chem. 2016 Jan 22; 2015 Dec 1. PMID: 26627836.
  • The Regulation of Chromatin by Dynamic SUMO Modifications.Wilson NR, Hochstrasser M. Methods Mol Biol. 2016. PMID: 27631795.
  • A Single α Helix Drives Extensive Remodeling of the Proteasome Lid and Completion of Regulatory Particle Assembly.Tomko RJ Jr, Taylor DW, Chen ZA, Wang HW, Rappsilber J, Hochstrasser M. Cell. 2015 Oct 8. PMID: 26451487.
  • STUbL-mediated degradation of the transcription factor MATα2 requires degradation elements that coincide with corepressor binding sites.Hickey CM, Hochstrasser M. Mol Biol Cell. 2015 Oct 1; 2015 Aug 5. PMID: 26246605.
  • Proteasomes: Isolation and Activity Assays.Li Y, Tomko RJ Jr, Hochstrasser M. Curr Protoc Cell Biol. 2015 Jun 1; 2015 Jun 1. PMID: 26061243.
  • Ubiquitin-dependent protein degradation at the yeast endoplasmic reticulum and nuclear envelope.Zattas D, Hochstrasser M. Crit Rev Biochem Mol Biol. 2015 Jan-Feb; 2014 Sep 18. PMID: 25231236.
  • Site-specific cation release drives actin filament severing by vertebrate cofilin.Kang H, Bradley MJ, Cao W, Zhou K, Grintsevich EE, Michelot A, Sindelar CV, Hochstrasser M, De La Cruz EM. Proc Natl Acad Sci U S A. 2014 Dec 16; 2014 Dec 2. PMID: 25468977.
  • The intrinsically disordered Sem1 protein functions as a molecular tether during proteasome lid biogenesis.Tomko RJ Jr, Hochstrasser M. Mol Cell. 2014 Feb 6; 2014 Jan 9. PMID: 24412063.
  • Assembly of the 20S proteasome.Kunjappu MJ, Hochstrasser M. Biochim Biophys Acta. 2014 Jan; 2013 Mar 16. PMID: 23507199.
  • A conserved protein with AN1 zinc finger and ubiquitin-like domains modulates Cdc48 (p97) function in the ubiquitin-proteasome pathway.Sá-Moura B, Funakoshi M, Tomko RJ Jr, Dohmen RJ, Wu Z, Peng J, Hochstrasser M. J Biol Chem. 2013 Nov 22; 2013 Oct 11. PMID: 24121501.
  • N-terminal acetylation of the yeast Derlin Der1 is essential for Hrd1 ubiquitin-ligase activity toward luminal ER substrates.Zattas D, Adle DJ, Rubenstein EM, Hochstrasser M. Mol Biol Cell. 2013 Apr; 2013 Jan 30. PMID: 23363603.
  • Molecular architecture and assembly of the eukaryotic proteasome.Tomko RJ Jr, Hochstrasser M. Annu Rev Biochem. 2013; 2013 Mar 13. PMID: 23495936.
  • Function and regulation of SUMO proteases.Hickey CM, Wilson NR, Hochstrasser M. Nat Rev Mol Cell Biol. 2012 Dec. PMID: 23175280.
  • Aberrant substrate engagement of the ER translocon triggers degradation by the Hrd1 ubiquitin ligase.Rubenstein EM, Kreft SG, Greenblatt W, Swanson R, Hochstrasser M. J Cell Biol. 2012 Jun 11. PMID: 22689655.
  • A new class of SUMO proteases.Gillies J, Hochstrasser M. EMBO Rep. 2012 Apr 2; 2012 Apr 2. PMID: 22422001.
  • Disulfide engineering to map subunit interactions in the proteasome and other macromolecular complexes.Hochstrasser M, Funakoshi M. Methods Mol Biol. 2012. PMID: 22350897.
  • Desumoylation of the endoplasmic reticulum membrane VAP family protein Scs2 by Ulp1 and SUMO regulation of the inositol synthesis pathway.Felberbaum R, Wilson NR, Cheng D, Peng J, Hochstrasser M. Mol Cell Biol. 2012 Jan; 2011 Oct 24. PMID: 22025676.
  • Incorporation of the Rpn12 subunit couples completion of proteasome regulatory particle lid assembly to lid-base joining.Tomko RJ Jr, Hochstrasser M. Mol Cell. 2011 Dec 23. PMID: 22195964.
  • Analysis of protein ubiquitination.Laney JD, Hochstrasser M. Curr Protoc Protein Sci. 2011 Nov. PMID: 22045559.
  • An unusual transmembrane helix in the endoplasmic reticulum ubiquitin ligase Doa10 modulates degradation of its cognate E2 enzyme.Kreft SG, Hochstrasser M. J Biol Chem. 2011 Jun 10; 2011 Apr 5. PMID: 21467040.
  • Order of the proteasomal ATPases and eukaryotic proteasome assembly.Tomko RJ Jr, Hochstrasser M. Cell Biochem Biophys. 2011 Jun. PMID: 21461838.
  • A conserved 20S proteasome assembly factor requires a C-terminal HbYX motif for proteasomal precursor binding.Kusmierczyk AR, Kunjappu MJ, Kim RY, Hochstrasser M. Nat Struct Mol Biol. 2011 May; 2011 Apr 17. PMID: 21499243.
  • Redundancy and variation in the ubiquitin-mediated proteolytic targeting of a transcription factor.Rubenstein EM, Hochstrasser M. Cell Cycle. 2010 Nov 1; 2010 Nov 22. PMID: 20980825.
  • A WLM protein with SUMO-directed protease activity.Su D, Hochstrasser M. Mol Cell Biol. 2010 Aug; 2010 Jun 21. PMID: 20566698.
  • Heterohexameric ring arrangement of the eukaryotic proteasomal ATPases: implications for proteasome structure and assembly.Tomko RJ Jr, Funakoshi M, Schneider K, Wang J, Hochstrasser M. Mol Cell. 2010 May 14. PMID: 20471945.
  • SUMO-independent in vivo activity of a SUMO-targeted ubiquitin ligase toward a short-lived transcription factor.Xie Y, Rubenstein EM, Matt T, Hochstrasser M. Genes Dev. 2010 May; 2010 Apr 13. PMID: 20388728.
  • Multiple assembly chaperones govern biogenesis of the proteasome regulatory particle base.Funakoshi M, Tomko RJ Jr, Kobayashi H, Hochstrasser M. Cell. 2009 May 29; 2009 May 14. PMID: 19446322.
  • Essential role of nuclear localization for yeast Ulp2 SUMO protease function.Kroetz MB, Su D, Hochstrasser M. Mol Biol Cell. 2009 Apr; 2009 Feb 18. PMID: 19225149.
  • Origin and function of ubiquitin-like proteins.Hochstrasser M. Nature. 2009 Mar 26. PMID: 19325621.
  • Small epitope-linker modules for PCR-based C-terminal tagging in Saccharomyces cerevisiae.Funakoshi M, Hochstrasser M. Yeast. 2009 Mar. PMID: 19243080.
  • Identification of SUMO-interacting proteins by yeast two-hybrid analysis.Kroetz MB, Hochstrasser M. Methods Mol Biol. 2009. PMID: 19107413.
  • Degradation of the bile salt export pump at endoplasmic reticulum in progressive familial intrahepatic cholestasis type II.Wang L, Dong H, Soroka CJ, Wei N, Boyer JL, Hochstrasser M. Hepatology. 2008 Nov. PMID: 18798335.
  • Some assembly required: dedicated chaperones in eukaryotic proteasome biogenesis.Kusmierczyk AR, Hochstrasser M. Biol Chem. 2008 Sep. PMID: 18713001.
  • A multimeric assembly factor controls the formation of alternative 20S proteasomes.Kusmierczyk AR, Kunjappu MJ, Funakoshi M, Hochstrasser M. Nat Struct Mol Biol. 2008 Mar; 2008 Feb 17. PMID: 18278055.
  • Ulp2 and the DNA damage response: desumoylation enables safe passage through mitosis.Felberbaum R, Hochstrasser M. Cell Cycle. 2008 Jan 1; 2007 Oct 28. PMID: 18196960.
  • The yeast Hex3.Slx8 heterodimer is a ubiquitin ligase stimulated by substrate sumoylation.Xie Y, Kerscher O, Kroetz MB, McConchie HF, Sung P, Hochstrasser M. J Biol Chem. 2007 Nov 23; 2007 Sep 11. PMID: 17848550.
  • The Ulp2 SUMO protease is required for cell division following termination of the DNA damage checkpoint.Schwartz DC, Felberbaum R, Hochstrasser M. Mol Cell Biol. 2007 Oct; 2007 Jul 30. PMID: 17664284.
  • A nuclear envelope protein linking nuclear pore basket assembly, SUMO protease regulation, and mRNA surveillance.Lewis A, Felberbaum R, Hochstrasser M. J Cell Biol. 2007 Aug 27. PMID: 17724121.
  • Ubiquitin ligation without a ligase.Hochstrasser M. Dev Cell. 2007 Jul. PMID: 17609103.
  • beta-Subunit appendages promote 20S proteasome assembly by overcoming an Ump1-dependent checkpoint.Li X, Kusmierczyk AR, Wong P, Emili A, Hochstrasser M. EMBO J. 2007 May 2; 2007 Apr 12. PMID: 17431397.
  • Autoregulation of an E2 enzyme by ubiquitin-chain assembly on its catalytic residue.Ravid T, Hochstrasser M. Nat Cell Biol. 2007 Apr; 2007 Feb 21. PMID: 17310239.
  • Spatially regulated ubiquitin ligation by an ER/nuclear membrane ligase.Deng M, Hochstrasser M. Nature. 2006 Oct 19. PMID: 17051211.

Lab Member Selected Publications

Jason Berk's Select Publications

Hong Yeoul Ryus Select Publications