2011
Genome-wide detection of novel regulatory RNAs in E. coli
Raghavan R, Groisman EA, Ochman H. Genome-wide detection of novel regulatory RNAs in E. coli. Genome Research 2011, 21: 1487-1497. PMID: 21665928, PMCID: PMC3166833, DOI: 10.1101/gr.119370.110.Peer-Reviewed Original ResearchConceptsSmall RNAsLeader sequenceIntergenic regionRegulatory elementsRegulatory RNAsNew small RNAsStable RNA secondary structureNovel regulatory RNAsProtein-coding transcriptsNovel small RNAsGenome-wide detectionNoncoding regulatory RNAsE. coliRNA secondary structureProtein HfqPhylogenetic conservationBacterial genomesEvolutionary analysisPresence of hundredsSequencing approachGene expressionCompensatory mutationsEnteric speciesSecondary structureEscherichia coli
2010
A Bacterial mRNA Leader that Employs Different Mechanisms to Sense Disparate Intracellular Signals
Park SY, Cromie MJ, Lee EJ, Groisman EA. A Bacterial mRNA Leader that Employs Different Mechanisms to Sense Disparate Intracellular Signals. Cell 2010, 142: 737-748. PMID: 20813261, PMCID: PMC2967377, DOI: 10.1016/j.cell.2010.07.046.Peer-Reviewed Original ResearchMeSH Keywords5' Untranslated RegionsAdenosine TriphosphatasesBacterial ProteinsBase SequenceGene Expression Regulation, BacterialMagnesiumMembrane Transport ProteinsMolecular Sequence DataProlineRegulatory Sequences, Ribonucleic AcidRNA, MessengerSalmonella typhimuriumSequence AlignmentTranscription, GeneticConceptsLeader sequence