2015
Identification of cancer‐related genes and motifs in the human gene regulatory network
Carson M, Gu J, Yu G, Lu H. Identification of cancer‐related genes and motifs in the human gene regulatory network. IET Systems Biology 2015, 9: 128-134. PMID: 26243828, PMCID: PMC8687282, DOI: 10.1049/iet-syb.2014.0058.Peer-Reviewed Original Research
2013
Deep mRNA Sequencing Analysis to Capture the Transcriptome Landscape of Zebrafish Embryos and Larvae
Yang H, Zhou Y, Gu J, Xie S, Xu Y, Zhu G, Wang L, Huang J, Ma H, Yao J. Deep mRNA Sequencing Analysis to Capture the Transcriptome Landscape of Zebrafish Embryos and Larvae. PLOS ONE 2013, 8: e64058. PMID: 23700457, PMCID: PMC3659048, DOI: 10.1371/journal.pone.0064058.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsBlastulaCleavage Stage, OvumEmbryonic DevelopmentGastrulaGene Expression ProfilingGene Expression Regulation, DevelopmentalHigh-Throughput Nucleotide SequencingLarvaOligonucleotide Array Sequence AnalysisSequence Analysis, RNATranscription FactorsTranscriptomeWnt Signaling PathwayZebrafishZebrafish ProteinsConceptsTranscriptome dynamicsZebrafish embryonic developmentTranscription factor familyDistinct expression patternsRNA-seq dataGene expression profilesZygotic genomeZebrafish developmentDeep mRNATranscriptome landscapeAverage expression levelEarly gastrulationGene clusterZebrafish embryosEmbryonic developmentTranscriptomic researchFactor familyExpression patternsExpression profilesFunctional pathwaysMolecular eventsEmbryonic stagesGenesCellular mechanismsExpression levels
2010
Analysis of floral transcription factors from Lycoris longituba
He Q, Cui S, Gu J, Zhang H, Wang M, Zhou Y, Zhang L, Huang M. Analysis of floral transcription factors from Lycoris longituba. Genomics 2010, 96: 119-127. PMID: 20406677, DOI: 10.1016/j.ygeno.2010.04.002.Peer-Reviewed Original ResearchConceptsTranscription factorsLycoris longitubaPutative transcription factorSpecific promoter regionsTF familiesTF genesL. longitubaFloral tissuesFlower formPhylogenetic analysisFloral developmentFlower colorGene transcriptionFlowering processTarget genesExpression patternsPromoter regionFlowering phaseReal-time RT-PCRGenesRT-PCRMYBMADSImportant roleTranscription