Kathryn Fontaine
Research Development Technician Imaging Research CenterCards
About
Research
Publications
2024
Data-driven non-rigid motion detection and correction for NeuroEXPLORER
Zhang J, Sun C, Volpi T, Zeng T, Fontaine K, Du Y, Toyonaga T, Onofrey J, Lu Y, Carson R. Data-driven non-rigid motion detection and correction for NeuroEXPLORER. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10658289.Peer-Reviewed Original ResearchNon-rigid motionNon-rigid motion estimationMotion dataNon-rigid regionsHead motion dataTracking capabilityMotion estimationMotion detectionRigid transformationImage-derived input functionMotion tracking systemImage blurringCarotid arteryEffective MCMotion patternsPatient movementTracking systemMotion correction frameworkBrain PET systemRigid motionMotion-corrected reconstructionFacial surfaceRigid motion correctionCorrect reconstructionCorrection frameworkMOLAR-NX: building a PET reconstruction framework for exploring the novel features provided by the NeuroEXPLORER
Fontaine K, Gallezot J, Zhang J, He L, Gravel P, Zeng T, Li T, Li Y, Leung E, Sun X, Guo L, Mulnix T, Toyonaga T, Lu Y, Li H, Badawi R, Qi J, Carson R. MOLAR-NX: building a PET reconstruction framework for exploring the novel features provided by the NeuroEXPLORER. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10655187.Peer-Reviewed Original ResearchReconstruction processDepth of interactionReconstruction frameworkAdvanced frameworkFramework's effectivenessMask featuresNovel featuresContrast recoveryScatter correction methodReconstruction softwareFrameworkListmode dataDownsamplingMotion correctionPhantom studyListmode filesFeaturesCorrection methodSoftwareFilesNeuroExplorerReconstructionLarge human cohort study of markerless head motion tracking for brain PET
Zeng T, Zhang J, Gallezot J, Fontaine K, Gravel P, Jiang W, Mulnix T, Yang Z, Zhang X, Hu L, Carson R. Large human cohort study of markerless head motion tracking for brain PET. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10656091.Peer-Reviewed Original ResearchPost-reconstruction registrationEvent-by-eventBrain PET imagingMotion correction techniqueQuantitative PET imagingPET imagingBrain PETHead motionTime activity curvesStudy of brain functionImage qualityMotion tracking systemGray matter regionsCorrection techniqueMotionHuman cohort studiesAverage SUVPET measurementsMotion blurMatter regionsSuperior performanceTracking systemPolarisHigh-resolution brain phantom data, with flexible contrast: Validation on the NeuroExplorer (NX)
Gravel P, Toyonaga T, Gallezot J, Fontaine K, Martins S, Mulnix T, Carson R. High-resolution brain phantom data, with flexible contrast: Validation on the NeuroExplorer (NX). 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10656366.Peer-Reviewed Original ResearchQuantitative accuracyPhantom dataSpatial resolutionIterative reconstruction algorithmListmode dataAttenuation correctionPhantom studyPhantomResolution measurementsAttenuation propertiesReconstructed imagesReconstruction algorithmPET imagingCorrection accuracyResolutionScatteringAxial directionAttenuationContrastCorrectionImage-Derived Input Functions on an Ultra-High Performance Brain PET Scanner: Minimizing the Carotid Partial Volume Effect
Volpi T, Zeng T, Khattar N, Toyonaga T, Martins S, Mulnix T, Fontaine K, Gallezot J, Carson R. Image-Derived Input Functions on an Ultra-High Performance Brain PET Scanner: Minimizing the Carotid Partial Volume Effect. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10658264.Peer-Reviewed Original ResearchMotion correction quality control of markerless head motion tracking for ultrahigh performance brain PET
Zeng T, Zhang J, Volpi T, Gallezot J, Fontaine K, Khattar N, Jiang W, Yang Z, Wan Q, Wang S, Li T, Zhang X, Hu L, Carson R. Motion correction quality control of markerless head motion tracking for ultrahigh performance brain PET. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10658040.Peer-Reviewed Original ResearchBrain PET studiesMotion correctionMotion-free imagesImpact of motionPET systemCombined metricImage qualityResolution degradationBrain PETGating methodPET dataFacial expression experimentsSpatial resolutionDetect facial expressionsNon-rigid movementEnhanced image qualityHuman scansGateMotion blurPET studiesMotion tracking systemPlanned motionTracking failureMotionNeuroimaging studiesAdaptive Deep Image Prior Enhances Ultra-Low Dose PET Imaging with NeuroEXPLORER
Li A, Gravel P, Gallezot J, Toyonaga T, Fontaine K, Carson R, Tang J. Adaptive Deep Image Prior Enhances Ultra-Low Dose PET Imaging with NeuroEXPLORER. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10657691.Peer-Reviewed Original ResearchContrast recovery coefficientCounting imagingLearning-based denoising methodsHead motion correctionDeep Image PriorLow-dose imagesOptimal stopping iterationsDose imagesAttenuation mapBrain phantomDeep imagingFull-count dataImage priorsMotion correctionSignal-to-noise ratioDenoising methodSequence of outputsTraining dataPET imagingStopping iterationDecreased signal-to-noise ratioNoise ratioPost-processing techniquesReconstructed imagesRecovery coefficientFast Energy-Based Scatter Correction for 3D TOF-PET on NeuroExplorer
Guo L, Fontaine K, Gravel P, Mulnix T, Zhang J, Liu C, Carson R. Fast Energy-Based Scatter Correction for 3D TOF-PET on NeuroExplorer. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10657901.Peer-Reviewed Original ResearchSingle scatter simulationScatter estimationEnergy spectrumTOF binsField of viewAxial field-of-viewHigh-energy scatteringLong axial field-of-viewLow-activity regionsList-mode dataEnergy informationTOF-PETContrast phantomUniform phantomScattering phantomCounting statisticsScatter correctionOSEM reconstructionMultiple-scatteringScatteringScattering simulationsPhantomEvent distributionImproved contrastMonte-CarloFluoride transport in Arabidopsis thaliana plants is impaired in Fluoride EXporter (FEX) mutants
Tausta S, Fontaine K, Hillmer A, Strobel S. Fluoride transport in Arabidopsis thaliana plants is impaired in Fluoride EXporter (FEX) mutants. Plant Molecular Biology 2024, 114: 17. PMID: 38342783, PMCID: PMC10859346, DOI: 10.1007/s11103-023-01413-w.Peer-Reviewed Original ResearchConceptsFluoride exportMutant plantsWT plantsArabidopsis thaliana plantsSingle cell eukaryotesMulticellular plantsThaliana plantsCell eukaryotesFluoride toleranceTerminal tissuesMutantsFluoride transportPlantsFloral stemsWildtypeArabidopsisEukaryotesEnvironmental toxinsStemBacteriaPositron emission tomographyPrimary locusToxin
2023
Markerless head motion tracking and event-by-event correction in brain PET
Zeng T, Lu Y, Jiang W, Zheng J, Zhang J, Gravel P, Wan Q, Fontaine K, Mulnix T, Jiang Y, Yang Z, Revilla E, Naganawa M, Toyonaga T, Henry S, Zhang X, Cao T, Hu L, Carson R. Markerless head motion tracking and event-by-event correction in brain PET. Physics In Medicine And Biology 2023, 68: 245019. PMID: 37983915, PMCID: PMC10713921, DOI: 10.1088/1361-6560/ad0e37.Peer-Reviewed Original ResearchConceptsPoint source studyHead motion correctionSmaller residual displacementMotion correctionIterative closest point (ICP) registration algorithmHead motion trackingSpatial resolutionResidual displacementData-driven evaluation methodHigh spatial resolutionLow noiseMotion trackingStereovision cameraMotion tracking deviceStructured lightEvent correctionBrain positron emission tomography (PET) imagingTracking deviceReconstruction resultsHMT methodPoint cloudsNegative biasReference cloudUMTEvaluation method