2019
Combining multiple connectomes improves predictive modeling of phenotypic measures
Gao S, Greene AS, Constable RT, Scheinost D. Combining multiple connectomes improves predictive modeling of phenotypic measures. NeuroImage 2019, 201: 116038. PMID: 31336188, PMCID: PMC6765422, DOI: 10.1016/j.neuroimage.2019.116038.Peer-Reviewed Original ResearchConceptsMultiple connectomesLarge open-source datasetOpen-source datasetNovel prediction frameworkPredictive modelingSingle predictive modelPredictive modelArt algorithmsPrediction frameworkMultiple tasksPredictive model approachPrincipled waySpecific algorithmsFunctional connectivity matricesConnectivity matrixDifferent tasksPrediction performanceConnectome-based predictive modelingHuman Connectome ProjectTaskSuperior performanceAlgorithmComplementary informationNaïve extensionsConnectome Project
2013
A Graphics Processing Unit Accelerated Motion Correction Algorithm and Modular System for Real-time fMRI
Scheinost D, Hampson M, Qiu M, Bhawnani J, Constable RT, Papademetris X. A Graphics Processing Unit Accelerated Motion Correction Algorithm and Modular System for Real-time fMRI. Neuroinformatics 2013, 11: 291-300. PMID: 23319241, PMCID: PMC3644525, DOI: 10.1007/s12021-013-9176-3.Peer-Reviewed Case Reports and Technical NotesConceptsGraphics processing unitsNovel graphics processing unitMotion correction algorithmProcessing unitReal-time methodProcessing delayCorrection algorithmSystem designMotion correction strategiesOffline methodsAlgorithmAvailable softwareReal-time functional magnetic resonance imagingModular approachValuable featuresModular systemPresent algorithmReal-time fMRIMotion correctionMotion parametersSoftwareNew technologiesNew systemCorrection strategyEstimates of motion
2011
WHOLE BODY NONRIGID CT-PET REGISTRATION USING WEIGHTED DEMONS
Suh JW, Kwon O, Scheinost D, Sinusas AJ, Cline GW, Papademetris X. WHOLE BODY NONRIGID CT-PET REGISTRATION USING WEIGHTED DEMONS. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2011, 1: 1223-1226. PMID: 23377533, PMCID: PMC3557845, DOI: 10.1109/isbi.2011.5872622.Peer-Reviewed Original ResearchEmission PET imagesDistance similarity measureDeformable registration processNew registration methodSeparate scannersSimilarity measureImage setsPositron emission tomography (PET) imagesImage characteristicsRegistration methodNonrigid changesRegistration processTomography imagesDemons algorithmImagesImproved performanceEmission tomography imagesPET imagesRegistrationAlgorithmUnified Framework for Development, Deployment and Robust Testing of Neuroimaging Algorithms
Joshi A, Scheinost D, Okuda H, Belhachemi D, Murphy I, Staib LH, Papademetris X. Unified Framework for Development, Deployment and Robust Testing of Neuroimaging Algorithms. Neuroinformatics 2011, 9: 69-84. PMID: 21249532, PMCID: PMC3066099, DOI: 10.1007/s12021-010-9092-8.Peer-Reviewed Original ResearchConceptsUser interface controlsUser interfaceNovel object-oriented frameworkCommand-line user interfaceGraphical user interface controlsMedical image analysisObject-oriented frameworkComplex image analysisImage analysisPlatform interoperabilitySoftware objectsReusable componentsInterface controlSource codeSuch algorithmsFramework idealMultiple platformsUnified frameworkAlgorithmRapid developmentDeploymentThorough testingPublic useFrameworkPlatform