Fernando de Miguel, PhD
Research & Publications
Biography
News
Research Summary
As a graduate student, Fernando has been working in the characterization of alternative splicing events associated with lung cancer. In collaboration with other group, he participated in the development of an algorithm called ExonPointer which identified splicing cassette events from microarray platforms. This technique allowed him to detect many alternative splicing events caused by the proto-oncogene SRSF1 in lung cancer cell lines and studied their role in tumor progression (de Miguel FJ et al. Cancer Research. 2014). He later applied this technique to characterize alternative splicing events present in non-small cell lung cancer (NSCLC) primary tumors. This allowed him to identify the splicing factor QKI as responsible of the majority of the events. He also showed that QKI was downregulated in NSCLC and that QKI expression was a prognostic marker for patients (de Miguel FJ et al. Molecular Oncology. 2016).
Fernando joined the Politi lab as a Postdoctoral Associate to study the mechanisms of acquired resistance to targeted therapies and immunotherapies from epigenetics approaches.
Selected Publications
- Identification of alternative splicing events regulated by the oncogenic factor SRSF1 in lung cancer.de Miguel FJ, Sharma RD, Pajares MJ, Montuenga LM, Rubio A, Pio R. Identification of alternative splicing events regulated by the oncogenic factor SRSF1 in lung cancer. Cancer Research 2014, 74: 1105-15. PMID: 24371231, DOI: 10.1158/0008-5472.CAN-13-1481.
- A large-scale analysis of alternative splicing reveals a key role of QKI in lung cancer.de Miguel FJ, Pajares MJ, Martínez-Terroba E, Ajona D, Morales X, Sharma RD, Pardo FJ, Rouzaut A, Rubio A, Montuenga LM, Pio R. A large-scale analysis of alternative splicing reveals a key role of QKI in lung cancer. Molecular Oncology 2016, 10: 1437-1449. PMID: 27555542, PMCID: PMC5423218, DOI: 10.1016/j.molonc.2016.08.001.
- EventPointer: an effective identification of alternative splicing events using junction arrays.Romero JP, Muniategui A, De Miguel FJ, Aramburu A, Montuenga L, Pio R, Rubio A. EventPointer: an effective identification of alternative splicing events using junction arrays. BMC Genomics 2016, 17: 467. PMID: 27315794, PMCID: PMC4912780, DOI: 10.1186/s12864-016-2816-x.
- Blockade of the Complement C5a/C5aR1 Axis Impairs Lung Cancer Bone Metastasis by CXCL16-mediated Effects.Ajona D, Zandueta C, Corrales L, Moreno H, Pajares MJ, Ortiz-Espinosa S, Martínez-Terroba E, Perurena N, de Miguel FJ, Jantus-Lewintre E, Camps C, Vicent S, Agorreta J, Montuenga LM, Pio R, Lecanda F. Blockade of the Complement C5a/C5aR1 Axis Impairs Lung Cancer Bone Metastasis by CXCL16-mediated Effects. American Journal Of Respiratory And Critical Care Medicine 2018, 197: 1164-1176. PMID: 29327939, PMCID: PMC6835094, DOI: 10.1164/rccm.201703-0660OC.
- Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm.Romero JP, Ortiz-Estévez M, Muniategui A, Carrancio S, de Miguel FJ, Carazo F, Montuenga LM, Loos R, Pío R, Trotter MWB, Rubio A. Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm. BMC Genomics 2018, 19: 703. PMID: 30253752, PMCID: PMC6156849, DOI: 10.1186/s12864-018-5082-2.