BrainGNN: Interpretable Brain Graph Neural Network for fMRI Analysis
Li X, Zhou Y, Dvornek N, Zhang M, Gao S, Zhuang J, Scheinost D, Staib LH, Ventola P, Duncan JS. BrainGNN: Interpretable Brain Graph Neural Network for fMRI Analysis. Medical Image Analysis 2021, 74: 102233. PMID: 34655865, PMCID: PMC9916535, DOI: 10.1016/j.media.2021.102233.Peer-Reviewed Original ResearchMeSH KeywordsAutism Spectrum DisorderBrainConnectomeHumansMagnetic Resonance ImagingNeural Networks, ComputerConceptsFunctional magnetic resonance imagesGraph neural network frameworkMedical image analysisGraph neural networkGraph convolutional layersNeural network frameworkDifferent evaluation metricsSpecific task statesIndependent fMRI datasetsPooling layerConvolutional layersConsistency lossNetwork frameworkNeural networkFMRI datasetsImage analysis methodEvaluation metricsDetection resultsBrain graphsSubjects releaseROI selectionImage analysisCognitive stimuliTask statesFMRI analysisNeuropsychiatric disease classification using functional connectomics - results of the connectomics in neuroimaging transfer learning challenge
Schirmer MD, Venkataraman A, Rekik I, Kim M, Mostofsky SH, Nebel MB, Rosch K, Seymour K, Crocetti D, Irzan H, Hütel M, Ourselin S, Marlow N, Melbourne A, Levchenko E, Zhou S, Kunda M, Lu H, Dvornek NC, Zhuang J, Pinto G, Samal S, Zhang J, Bernal-Rusiel JL, Pienaar R, Chung AW. Neuropsychiatric disease classification using functional connectomics - results of the connectomics in neuroimaging transfer learning challenge. Medical Image Analysis 2021, 70: 101972. PMID: 33677261, PMCID: PMC9115580, DOI: 10.1016/j.media.2021.101972.Peer-Reviewed Original ResearchConceptsAttention-deficit/hyperactivity disorderAutism Brain Imaging Data ExchangeResting-state fMRI time seriesAutism spectrum disorder (ASD) patientsHuman Connectome ProjectADHD modelHyperactivity disorderADHD comorbidityASD classificationConnectome ProjectOpen-source image analysis platformFMRI time seriesBrain connectomicsFunctional connectomicsClassification methodologyLearning challengesOpen-source datasetField of connectomicsParcellation atlasesDisorder patientsImage analysis platformOmission rateParticipantsConnectomicsMICCAI 2019