FAQ & Links

Neuroproteomic Center

• FAQ about the Neuroproteomics Center

FAQ About Mass Spectrometry

• FAQ about MS
• FAQ about FTICR
• FAQ about YPED

Proteomics Tools

• Analysis of Protein: Protein Interactions
• Class Prediction Software for Protein Mass Spectrometry Data
• Motips: A Motif Analysis Pipeline Predicting the Binding Targets of Protein Domains, such as the SH3 and Kinase Phosphorylation Domains
• PARE: Protein Abundance and mRNA Expression Correlation Tool

Yale Proteomic Web Sites

• Mark Gerstein Laboratory
• Analysis of mRNA and Protein Expression Data

Other NIDA Neuroproteomics Centers

• The UIUC Center for Neuroproteomics on Cell-Cell Signaling
• NIDA Genomics: The Proteomics Core

Other Neuroproteomics Centers

• NMDNJ Center For Advanced Proteomics Research

Protein Phosphorylation

• Phospho.ELM: a database of S/T/Y phosphorylation sites
• PHOSIDA: Posttranslational Modification Database
• MIT Scansite

Allen Brain Atlas and the GENSAT Gene Expression Atlas of the Central Nervous System in the Mouse

• The Allen Mouse Brain Atlas
• The GENSAT Project at The Rockefeller University

HUPO

• HUPO: Human Proteome Organisation
• HUPO: Human Brain Proteome Project

Other Proteomics Links

• ProtIG: Proteomics Interest Group